STRINGSTRING
Sps_00194 Sps_00194 Sps_00195 Sps_00195 Sps_00276 Sps_00276 Sps_00277 Sps_00277 Sps_00278 Sps_00278 Sps_00639 Sps_00639 Sps_00640 Sps_00640 Sps_00830 Sps_00830 Sps_00831 Sps_00831 Sps_00832 Sps_00832 Sps_00970 Sps_00970 Sps_00971 Sps_00971 Sps_00972 Sps_00972 Sps_01056 Sps_01056 Sps_01057 Sps_01057 Sps_01552 Sps_01552 Sps_01553 Sps_01553 Sps_01554 Sps_01554 Sps_01555 Sps_01555 Sps_01556 Sps_01556 Sps_01636 Sps_01636 Sps_01637 Sps_01637 Sps_01638 Sps_01638 Sps_01916 Sps_01916 Sps_01917 Sps_01917 Sps_02173 Sps_02173 Sps_02174 Sps_02174 Sps_02207 Sps_02207 Sps_02208 Sps_02208 Sps_02315 Sps_02315 Sps_02316 Sps_02316 Sps_02317 Sps_02317 Sps_02630 Sps_02630 Sps_02631 Sps_02631 Sps_03024 Sps_03024 Sps_03025 Sps_03025 Sps_03026 Sps_03026 Sps_03111 Sps_03111 Sps_03112 Sps_03112 Sps_03818 Sps_03818 Sps_03819 Sps_03819 Sps_03820 Sps_03820 Sps_04149 Sps_04149 Sps_04150 Sps_04150 Sps_04474 Sps_04474 Sps_04475 Sps_04475 Sps_04770 Sps_04770 Sps_04771 Sps_04771 Sps_04772 Sps_04772 Sps_04773 Sps_04773 Sps_04774 Sps_04774 Sps_04775 Sps_04775 Sps_04776 Sps_04776 Sps_05107 Sps_05107 Sps_05273 Sps_05273 Sps_05274 Sps_05274 Sps_05473 Sps_05473 Sps_05474 Sps_05474
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00194PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (391 aa)
Sps_00195PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. (1047 aa)
Sps_00276PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1043 aa)
Sps_00277PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (503 aa)
Sps_00278Hypothetical protein. (138 aa)
Sps_00639PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (355 aa)
Sps_00640Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1030 aa)
Sps_00830PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (407 aa)
Sps_00831PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. (1055 aa)
Sps_00832PFAM: Outer membrane efflux protein; 'TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family'. (477 aa)
Sps_00970PFAM: Outer membrane efflux protein. (448 aa)
Sps_00971PFAM: HlyD family secretion protein; Biotin-lipoyl like. (437 aa)
Sps_00972PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1047 aa)
Sps_01056PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (397 aa)
Sps_01057Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1073 aa)
Sps_01552ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family. (418 aa)
Sps_01553PFAM: HlyD family secretion protein. (407 aa)
Sps_01554PFAM: HlyD family secretion protein. (399 aa)
Sps_01555Multidrug resistance efflux pump; PFAM: HlyD family secretion protein. (351 aa)
Sps_01556ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (228 aa)
Sps_01636PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (375 aa)
Sps_01637Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1089 aa)
Sps_01638Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1018 aa)
Sps_01916Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1019 aa)
Sps_01917PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (407 aa)
Sps_02173Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1031 aa)
Sps_02174PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (424 aa)
Sps_02207Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1035 aa)
Sps_02208PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (369 aa)
Sps_02315Sodium/proton antiporter, CPA1 family; PFAM: Sodium/hydrogen exchanger family; TC 2.A.36. (685 aa)
Sps_02316PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. (1039 aa)
Sps_02317PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (392 aa)
Sps_02630PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (406 aa)
Sps_02631Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1060 aa)
Sps_03024Putative silver efflux pump; PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1083 aa)
Sps_03025PFAM: HlyD family secretion protein; Biotin-lipoyl like; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (418 aa)
Sps_03026PFAM: Outer membrane efflux protein. (447 aa)
Sps_03111PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (372 aa)
Sps_03112Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1029 aa)
Sps_03818'PFAM: Bacterial regulatory proteins, tetR family'. (210 aa)
Sps_03819PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (376 aa)
Sps_03820Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1029 aa)
Sps_04149PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (390 aa)
Sps_04150PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. (1047 aa)
Sps_04474PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. (1042 aa)
Sps_04475PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (387 aa)
Sps_04770'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS domain'. (422 aa)
Sps_04771Two component, sigma54 specific, transcriptional regulator, Fis family; 'PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain'. (503 aa)
Sps_04772PFAM: MacB-like periplasmic core domain; FtsX-like permease family. (403 aa)
Sps_04773PFAM: MacB-like periplasmic core domain; FtsX-like permease family. (433 aa)
Sps_04774ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (258 aa)
Sps_04775Hypothetical protein. (138 aa)
Sps_04776PFAM: HlyD family secretion protein. (421 aa)
Sps_05107PFAM: Outer membrane efflux protein; 'TIGRFAM: type I secretion outer membrane protein, TolC family'. (448 aa)
Sps_05273PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (359 aa)
Sps_05274Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1026 aa)
Sps_05473Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1037 aa)
Sps_05474PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (369 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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