STRINGSTRING
Sps_00334 Sps_00334 Sps_00335 Sps_00335 Sps_00419 Sps_00419 Sps_00420 Sps_00420 Sps_00453 Sps_00453 Sps_00524 Sps_00524 Sps_00800 Sps_00800 Sps_00838 Sps_00838 Sps_01019 Sps_01019 Sps_01020 Sps_01020 Sps_01189 Sps_01189 Sps_01302 Sps_01302 Sps_01305 Sps_01305 Sps_01334 Sps_01334 Sps_01500 Sps_01500 Sps_01501 Sps_01501 Sps_02205 Sps_02205 Sps_02206 Sps_02206 Sps_02219 Sps_02219 Sps_02220 Sps_02220 Sps_02401 Sps_02401 Sps_02402 Sps_02402 Sps_02726 Sps_02726 Sps_02755 Sps_02755 Sps_03181 Sps_03181 Sps_03182 Sps_03182 Sps_03198 Sps_03198 Sps_03685 Sps_03685 Sps_03687 Sps_03687 Sps_03752 Sps_03752 Sps_03884 Sps_03884 Sps_03885 Sps_03885 Sps_03886 Sps_03886 Sps_03928 Sps_03928 Sps_03929 Sps_03929 Sps_03971 Sps_03971 Sps_04002 Sps_04002 Sps_04080 Sps_04080 Sps_04142 Sps_04142 Sps_04154 Sps_04154 Sps_04155 Sps_04155 Sps_04202 Sps_04202 Sps_04216 Sps_04216 Sps_04217 Sps_04217 Sps_04218 Sps_04218 Sps_04219 Sps_04219 Sps_04223 Sps_04223 Sps_04618 Sps_04618 Sps_04620 Sps_04620 Sps_04913 Sps_04913 Sps_04946 Sps_04946 Sps_05215 Sps_05215 Sps_05216 Sps_05216 Sps_05280 Sps_05280 Sps_05490 Sps_05490 Sps_05491 Sps_05491
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00334'PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (459 aa)
Sps_00335Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (227 aa)
Sps_00419'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase'. (455 aa)
Sps_00420Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (224 aa)
Sps_00453'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (627 aa)
Sps_00524'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold'. (1140 aa)
Sps_00800Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (231 aa)
Sps_00838'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (689 aa)
Sps_01019'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain'. (929 aa)
Sps_01020Two component transcriptional regulator, LuxR family; 'PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family'. (214 aa)
Sps_01189'PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (479 aa)
Sps_01302'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phospho-acceptor) domain'. (432 aa)
Sps_01305'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phospho-acceptor) domain; PAS domain; CHASE3 domain; PAS fold'; TIGRFAM: PAS domain S-box. (1846 aa)
Sps_01334PAS domain S-box; 'PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold'; TIGRFAM: PAS domain S-box. (883 aa)
Sps_01500'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (423 aa)
Sps_01501'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (232 aa)
Sps_02205Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (237 aa)
Sps_02206'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase'. (444 aa)
Sps_02219PAS/PAC sensor signal transduction histidine kinase; 'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Domain of unknown function (DUF3329)'; TIGRFAM: phosphate regulon sensor kinase PhoR. (448 aa)
Sps_02220Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB. (229 aa)
Sps_02401PFAM: Response regulator receiver domain. (365 aa)
Sps_02402PAS/PAC sensor hybrid histidine kinase; 'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain'; TIGRFAM: PAS domain S-box. (680 aa)
Sps_02726'PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Protein of unknown function (DUF3365)'. (555 aa)
Sps_02755PFAM: Response regulator receiver domain. (120 aa)
Sps_03181Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (246 aa)
Sps_03182'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (491 aa)
Sps_03198Chemotaxis signal transduction protein; PFAM: CheW-like domain; Response regulator receiver domain. (326 aa)
Sps_03685PAS domain S-box; 'PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; Hpt domain; PAS fold'; TIGRFAM: PAS domain S-box. (1178 aa)
Sps_03687PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE). (434 aa)
Sps_03752PFAM: Response regulator receiver domain. (367 aa)
Sps_03884PFAM: Response regulator receiver domain. (384 aa)
Sps_03885PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (306 aa)
Sps_03886PAS domain S-box; 'PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; Hpt domain; PAS fold'; TIGRFAM: PAS domain S-box. (1484 aa)
Sps_03928CheY-like receiver domain-containing protein; PFAM: Response regulator receiver domain. (134 aa)
Sps_03929'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain'. (988 aa)
Sps_03971'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (235 aa)
Sps_04002'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (209 aa)
Sps_04080'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (517 aa)
Sps_04142Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (252 aa)
Sps_04154'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (228 aa)
Sps_04155'PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (483 aa)
Sps_04202Putative periplasmic ligand-binding sensor domain; 'PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold'. (1230 aa)
Sps_04216'PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain'; TIGRFAM: TMAO reductase sytem sensor TorS. (995 aa)
Sps_04217Hypothetical protein. (39 aa)
Sps_04218Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: Periplasmic binding proteins and sugar binding domain of LacI family; TIGRFAM: TMAO reductase system periplasmic protein TorT. (424 aa)
Sps_04219Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (244 aa)
Sps_04223'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (978 aa)
Sps_04618'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold'; TIGRFAM: PAS domain S-box. (897 aa)
Sps_04620PFAM: Response regulator receiver domain. (401 aa)
Sps_04913'PFAM: Ammonium Transporter Family; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'; TIGRFAM: ammonium transporter. (727 aa)
Sps_04946Two component transcriptional regulator, winged helix family; 'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (239 aa)
Sps_05215'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (235 aa)
Sps_05216'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (429 aa)
Sps_05280Multi-sensor hybrid histidine kinase; 'PFAM: Cache domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold'; TIGRFAM: PAS domain S-box. (1235 aa)
Sps_05490'PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'. (445 aa)
Sps_05491'PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal'. (225 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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