STRINGSTRING
flgI-2 flgI-2 flgH-2 flgH-2 Sps_03799 Sps_03799 Sps_03800 Sps_03800 Sps_03803 Sps_03803 Sps_03804 Sps_03804 Sps_03805 Sps_03805
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
flgI-2Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (363 aa)
flgH-2Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (228 aa)
Sps_03799PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; 'TIGRFAM: flagellar hook-basal body protein; flagellar basal-body rod protein FlgG, Gram-negative bacteria'; Belongs to the flagella basal body rod proteins family. (262 aa)
Sps_03800PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; Belongs to the flagella basal body rod proteins family. (247 aa)
Sps_03803Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (271 aa)
Sps_03804PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (138 aa)
Sps_03805Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (132 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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