STRINGSTRING
Sps_01734 Sps_01734 Sps_04767 Sps_04767 Sps_04573 Sps_04573 ychF ychF Sps_04048 Sps_04048 Sps_03881 Sps_03881 Sps_03508 Sps_03508 Sps_03234 Sps_03234 Sps_03218 Sps_03218 Sps_03114 Sps_03114 Sps_03080 Sps_03080 Sps_02847 Sps_02847 hcp hcp Sps_02393 Sps_02393 Sps_02353 Sps_02353 Sps_02301 Sps_02301 Sps_04929 Sps_04929 Sps_01616 Sps_01616 msrA-2 msrA-2 Sps_01113 Sps_01113 Sps_01075 Sps_01075 Sps_00916 Sps_00916 msrA msrA Sps_00622 Sps_00622 Sps_00326 Sps_00326
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_01734Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (330 aa)
Sps_04767Hypothetical protein. (110 aa)
Sps_04573Flavodoxin reductase family protein; PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain. (249 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa)
Sps_04048Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein. (147 aa)
Sps_03881PFAM: OsmC-like protein; 'TIGRFAM: peroxiredoxin, Ohr subfamily'. (160 aa)
Sps_03508NADPH oxidase 1; PFAM: Ferric reductase like transmembrane component; FAD-binding domain; Ferric reductase NAD binding domain. (558 aa)
Sps_03234PFAM: Protein of unknown function (DUF1107). (70 aa)
Sps_03218PFAM: Iron-containing alcohol dehydrogenase. (385 aa)
Sps_03114Putative membrane protein; 'PFAM: Protein of unknown function, DUF417'. (279 aa)
Sps_03080Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. (238 aa)
Sps_02847PFAM: Catalase; Catalase-related immune-responsive; Belongs to the catalase family. (488 aa)
hcpHydroxylamine reductase precursor; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (552 aa)
Sps_02393PFAM: Protein of unknown function (DUF328); Belongs to the UPF0246 family. (258 aa)
Sps_02353Fe-S cluster protector protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. (92 aa)
Sps_02301PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family. (160 aa)
Sps_04929Alkyl hydroperoxide reductase subunit F; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain; TIGRFAM: alkyl hydroperoxide reductase subunit F. (525 aa)
Sps_01616PFAM: Nickel-containing superoxide dismutase; 'TIGRFAM: superoxide dismutase, Ni'. (166 aa)
msrA-2methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (298 aa)
Sps_01113acyl-CoA synthetase (NDP forming); PFAM: CoA binding domain; ATP-grasp domain; Succinyl-CoA ligase like flavodoxin domain; Acetyltransferase (GNAT) domain. (896 aa)
Sps_01075PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase. (317 aa)
Sps_00916PFAM: Universal stress protein family. (310 aa)
msrAmethionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (159 aa)
Sps_00622Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (193 aa)
Sps_00326PFAM: Catalase; Catalase-related immune-responsive; Belongs to the catalase family. (502 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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