STRINGSTRING
Sps_04144 Sps_04144 Sps_03897 Sps_03897 Sps_03295 Sps_03295 Sps_02739 Sps_02739 Sps_01568 Sps_01568 Sps_05655 Sps_05655 Sps_00464 Sps_00464 Sps_00284 Sps_00284 Sps_00542 Sps_00542 Sps_05594 Sps_05594 Sps_05487 Sps_05487 Sps_04962 Sps_04962 Sps_02202 Sps_02202 Sps_01994 Sps_01994 Sps_01847 Sps_01847 Sps_01763 Sps_01763 Sps_04910 Sps_04910 Sps_04899 Sps_04899 Sps_04726 Sps_04726 Sps_00957 Sps_00957 Sps_04446 Sps_04446
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_04144PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (697 aa)
Sps_03897Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (771 aa)
Sps_03295Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (800 aa)
Sps_02739Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (685 aa)
Sps_01568Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (724 aa)
Sps_05655Outer membrane receptor for monomeric catechols; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (718 aa)
Sps_00464PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (700 aa)
Sps_00284PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (722 aa)
Sps_00542PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (698 aa)
Sps_05594PFAM: TonB-dependent Receptor Plug Domain; Outer membrane protein beta-barrel family; TIGRFAM: TonB-dependent siderophore receptor. (708 aa)
Sps_05487Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (718 aa)
Sps_04962Outer membrane receptor for Fe3+-dicitrate; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (732 aa)
Sps_02202Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (820 aa)
Sps_01994Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (715 aa)
Sps_01847Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (206 aa)
Sps_01763Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (655 aa)
Sps_04910PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (715 aa)
Sps_04899Outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial TonB protein C-terminal; TIGRFAM: TonB family C-terminal domain; TC 2.C.1.1.1. (253 aa)
Sps_04726Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent copper receptor. (687 aa)
Sps_00957Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain. (753 aa)
Sps_04446Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (758 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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