STRINGSTRING
hutH hutH Sps_00558 Sps_00558 Sps_01106 Sps_01106 Sps_00963 Sps_00963 queE queE Sps_00694 Sps_00694 Sps_01099 Sps_01099 argH argH Sps_04806 Sps_04806 dsdA dsdA Sps_03336 Sps_03336 Sps_02652 Sps_02652 Sps_01657 Sps_01657
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hutHHistidine ammonia-lyase; PFAM: Aromatic amino acid lyase; TIGRFAM: histidine ammonia-lyase. (510 aa)
Sps_00558PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (456 aa)
Sps_01106PFAM: Ureidoglycolate hydrolase. (172 aa)
Sps_00963Aspartate ammonia-lyase; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase. (480 aa)
queEPutative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (222 aa)
Sps_00694PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; 'TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form'. (455 aa)
Sps_01099PFAM: Ornithine cyclodeaminase/mu-crystallin family. (332 aa)
argHPFAM: Lyase; Argininosuccinate lyase C-terminal; TIGRFAM: argininosuccinate lyase. (455 aa)
Sps_048062,3-diaminopropionate biosynthesis protein SbnB; PFAM: Ornithine cyclodeaminase/mu-crystallin family; 'TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnB'. (337 aa)
dsdAD-serine ammonia-lyase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: D-serine ammonia-lyase; Belongs to the serine/threonine dehydratase family. DsdA subfamily. (442 aa)
Sps_03336Histidine ammonia-lyase; PFAM: Aromatic amino acid lyase; TIGRFAM: phenylalanine ammonia-lyase. (520 aa)
Sps_02652L-serine ammonia-lyase; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; 'TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form'. (455 aa)
Sps_01657L-serine ammonia-lyase; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; 'TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form'. (458 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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