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| gpmI | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (514 aa) | ||||
| gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (805 aa) | ||||
| fadB | Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (717 aa) | ||||
| Sps_00074 | Zn-finger domain-containing protein (topoisomerase type I-like); PFAM: Topoisomerase DNA binding C4 zinc finger. (187 aa) | ||||
| Sps_00149 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (181 aa) | ||||
| hldD | ADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (317 aa) | ||||
| menF | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (452 aa) | ||||
| Sps_00401 | PFAM: Redoxin; 'TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily'. (184 aa) | ||||
| Sps_00478 | PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase. (116 aa) | ||||
| Sps_00562 | PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (274 aa) | ||||
| fabA | 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (171 aa) | ||||
| Sps_00786 | Phosphoglucomutase, alpha-D-glucose phosphate-specific; 'PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I'; 'TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific'. (554 aa) | ||||
| gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (904 aa) | ||||
| Sps_00826 | PFAM: Domain of unknown function (DUF1904). (110 aa) | ||||
| Sps_00881 | PFAM: RNA pseudouridylate synthase; 'TIGRFAM: pseudouridine synthase, RluA family'. (238 aa) | ||||
| hisA | 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. (262 aa) | ||||
| Sps_01372 | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (319 aa) | ||||
| Sps_01416 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (160 aa) | ||||
| Sps_01493 | PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family. (309 aa) | ||||
| Sps_01526 | Aldose 1-epimerase-like enzyme; PFAM: Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (282 aa) | ||||
| Sps_01536 | PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase. (231 aa) | ||||
| topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (919 aa) | ||||
| Sps_01685 | Ribosomal large subunit pseudouridine synthase B; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (288 aa) | ||||
| trpC | PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpC family. (491 aa) | ||||
| topB | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] (649 aa) | ||||
| truA | tRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (261 aa) | ||||
| fadJ | Fatty oxidation complex, alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (708 aa) | ||||
| Sps_01836 | Hypothetical protein. (122 aa) | ||||
| Sps_01843 | PFAM: PPIC-type PPIASE domain. (92 aa) | ||||
| Sps_01878 | PFAM: SurA N-terminal domain; PPIC-type PPIASE domain. (621 aa) | ||||
| tig | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (434 aa) | ||||
| Sps_01889 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (187 aa) | ||||
| Sps_01966 | Phosphomannomutase; 'PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I'. (573 aa) | ||||
| Sps_01968 | PFAM: RNA pseudouridylate synthase. (290 aa) | ||||
| Sps_02026 | 2-methylaconitate cis-trans isomerase; PFAM: PrpF protein; TIGRFAM: probable AcnD-accessory protein PrpF. (426 aa) | ||||
| Sps_02042 | PFAM: Enoyl-CoA hydratase/isomerase family; 2-enoyl-CoA Hydratase C-terminal region. (377 aa) | ||||
| Sps_02075 | PFAM: RNA pseudouridylate synthase; 'TIGRFAM: pseudouridine synthase, RluA family'. (599 aa) | ||||
| Sps_02108 | Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; 'PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain'. (355 aa) | ||||
| Sps_02145 | tRNA pseudouridine synthase C; PFAM: RNA pseudouridylate synthase; 'TIGRFAM: pseudouridine synthase, RluA family'. (291 aa) | ||||
| Sps_02384 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (140 aa) | ||||
| pgi | PFAM: Phosphoglucose isomerase; Belongs to the GPI family. (545 aa) | ||||
| Sps_02408 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (210 aa) | ||||
| Sps_02414 | Chorismate mutase; PFAM: Prephenate dehydratase; Chorismate mutase type II; DAHP synthetase I family; 'TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 1'. (660 aa) | ||||
| Sps_02419 | Chorismate mutase; PFAM: Prephenate dehydrogenase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of T-protein. (379 aa) | ||||
| hemL | PFAM: Aminotransferase class-III; 'TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase'. (428 aa) | ||||
| Sps_02579 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (156 aa) | ||||
| Sps_02604 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (263 aa) | ||||
| Sps_02618 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (209 aa) | ||||
| rpiA | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (218 aa) | ||||
| Sps_02625 | Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (245 aa) | ||||
| rbsD | Ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (140 aa) | ||||
| Sps_02833 | PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (254 aa) | ||||
| Sps_02924 | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (344 aa) | ||||
| Sps_03001 | PFAM: RNA pseudouridylate synthase. (308 aa) | ||||
| dapF | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (280 aa) | ||||
| Sps_03236 | PFAM: Thioredoxin. (203 aa) | ||||
| Sps_03257 | Phosphomannomutase; 'PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I'. (480 aa) | ||||
| Sps_03406 | PFAM: Proline racemase; Belongs to the proline racemase family. (333 aa) | ||||
| gmhA | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (192 aa) | ||||
| Sps_03573 | FolB domain protein; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain. (124 aa) | ||||
| queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (345 aa) | ||||
| Sps_03612 | PFAM: RNA pseudouridylate synthase; 'TIGRFAM: pseudouridine synthase, RluA family'. (230 aa) | ||||
| Sps_03661 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (113 aa) | ||||
| Sps_03668 | UDP-galactose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase C-term subunit; TIGRFAM: UDP-glucose-4-epimerase GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa) | ||||
| Sps_03718 | PFAM: NAD dependent epimerase/dehydratase family. (317 aa) | ||||
| Sps_03722 | dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme. (143 aa) | ||||
| Sps_03723 | CDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; 'TIGRFAM: CDP-glucose 4,6-dehydratase'. (366 aa) | ||||
| Sps_03742 | UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; 'TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing'. (386 aa) | ||||
| Sps_03816 | Hypothetical protein. (189 aa) | ||||
| Sps_04022 | Protein-disulfide isomerase; PFAM: Thioredoxin. (262 aa) | ||||
| Sps_04028 | Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain. (307 aa) | ||||
| purE | Phosphoribosylaminoimidazole carboxylase, PurE protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (169 aa) | ||||
| truD | tRNA pseudouridine synthase, TruD family; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. (359 aa) | ||||
| Sps_04141 | PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (250 aa) | ||||
| deoB | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (405 aa) | ||||
| truB | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (320 aa) | ||||
| tpiA | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (260 aa) | ||||
| glmM | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (463 aa) | ||||
| Sps_04268 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (205 aa) | ||||
| Sps_04321 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (198 aa) | ||||
| Sps_04399 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (324 aa) | ||||
| Sps_04407 | PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (229 aa) | ||||
| Sps_04472 | Protein-disulfide isomerase; PFAM: Thioredoxin. (282 aa) | ||||
| Sps_04541 | PFAM: PPIC-type PPIASE domain. (92 aa) | ||||
| Sps_04565 | PFAM: Aminotransferase class-III; 'TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase'; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa) | ||||
| Sps_04610 | PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (236 aa) | ||||
| surA | Periplasmic chaperone for outer membrane proteins SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (434 aa) | ||||
| apaG | Uncharacterized protein affecting Mg2+/Co2+ transport; PFAM: Protein of unknown function (DUF525). (126 aa) | ||||
| nagB | Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (263 aa) | ||||
| Sps_04912 | PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (208 aa) | ||||
| Sps_04939 | Ribosomal large subunit pseudouridine synthase A; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (225 aa) | ||||
| Sps_04955 | Hypothetical protein. (284 aa) | ||||
| nnrE | yjeF-like protein, hydroxyethylthiazole kinase-related; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydrata [...] (499 aa) | ||||
| parC | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (757 aa) | ||||
| parE | DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (628 aa) | ||||
| Sps_05111 | PFAM: Enoyl-CoA hydratase/isomerase family. (245 aa) | ||||
| Sps_05173 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (358 aa) | ||||
| Sps_05203 | KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein. (325 aa) | ||||
| Sps_05246 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa) | ||||
| groL | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (549 aa) | ||||
| gmhA-2 | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (196 aa) | ||||
| Sps_05406 | Ribulose-5-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (224 aa) | ||||
| murI | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (288 aa) | ||||
| Sps_05489 | PFAM: RNA pseudouridylate synthase; 'TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621'. (224 aa) | ||||
| Sps_05540 | PFAM: Cystatin domain. (139 aa) | ||||
| mtnC | Acireductone synthase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family. (225 aa) | ||||