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Sps_00004 Sps_00004 Sps_00005 Sps_00005 Sps_00038 Sps_00038 Sps_00040 Sps_00040 Sps_00041 Sps_00041 Sps_00134 Sps_00134 Sps_00261 Sps_00261 Sps_00262 Sps_00262 Sps_00273 Sps_00273 Sps_00282 Sps_00282 Sps_00326 Sps_00326 ccmE ccmE ccmC ccmC Sps_00398 Sps_00398 Sps_00400 Sps_00400 Sps_00463 Sps_00463 Sps_00922 Sps_00922 Sps_00924 Sps_00924 Sps_00925 Sps_00925 Sps_01104 Sps_01104 msrQ msrQ Sps_01258 Sps_01258 Sps_01428 Sps_01428 Sps_01542 Sps_01542 Sps_01631 Sps_01631 Sps_01708 Sps_01708 Sps_01734 Sps_01734 Sps_01898 Sps_01898 Sps_01900 Sps_01900 Sps_01901 Sps_01901 Sps_01904 Sps_01904 kynA kynA Sps_02411 Sps_02411 Sps_02426 Sps_02426 Sps_02532 Sps_02532 Sps_02534 Sps_02534 Sps_02535 Sps_02535 Sps_02598 Sps_02598 nrfA nrfA hmp hmp cysI cysI Sps_02847 Sps_02847 Sps_02860 Sps_02860 Sps_02951 Sps_02951 Sps_02952 Sps_02952 Sps_03102 Sps_03102 Sps_03425 Sps_03425 Sps_03507 Sps_03507 Sps_03574 Sps_03574 Sps_03581 Sps_03581 Sps_03582 Sps_03582 Sps_04034 Sps_04034 Sps_04081 Sps_04081 Sps_04168 Sps_04168 Sps_04208 Sps_04208 Sps_04209 Sps_04209 Sps_04464 Sps_04464 Sps_04568 Sps_04568 apaG apaG Sps_04807 Sps_04807 Sps_05040 Sps_05040 Sps_05042 Sps_05042 Sps_05074 Sps_05074 nrfA-2 nrfA-2 Sps_05298 Sps_05298 Sps_05650 Sps_05650
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00004Heme/copper-type cytochrome/quinol oxidase, subunit 2; 'PFAM: Cytochrome c; Cytochrome C oxidase subunit II, periplasmic domain'. (492 aa)
Sps_00005Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome C and Quinol oxidase polypeptide I; 'TIGRFAM: cytochrome c oxidase, subunit I'; Belongs to the heme-copper respiratory oxidase family. (607 aa)
Sps_00038PFAM: Cytochrome c. (111 aa)
Sps_00040Hypothetical protein. (143 aa)
Sps_00041PFAM: Cytochrome c. (116 aa)
Sps_00134PFAM: Cytochrome c. (206 aa)
Sps_00261Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (542 aa)
Sps_00262Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (373 aa)
Sps_00273Hemoglobin-like flavoprotein; PFAM: Globin; Belongs to the globin family. (137 aa)
Sps_00282nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit; 'PFAM: NapC/NirT cytochrome c family, N-terminal region'. (187 aa)
Sps_00326PFAM: Catalase; Catalase-related immune-responsive; Belongs to the catalase family. (502 aa)
ccmECytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (161 aa)
ccmCHeme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (248 aa)
Sps_00398'PFAM: Cytochrome C oxidase, cbb3-type, subunit III'. (97 aa)
Sps_00400PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; cytochrome c nitrate reductase biogenesis protein NrfE. (659 aa)
Sps_00463PFAM: Phytochelatin synthase. (273 aa)
Sps_00922Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (322 aa)
Sps_00924'PFAM: Cytochrome C oxidase, mono-heme subunit/FixO'; 'TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II'. (208 aa)
Sps_00925PFAM: Cytochrome C and Quinol oxidase polypeptide I; 'TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I'; Belongs to the heme-copper respiratory oxidase family. (475 aa)
Sps_01104Putative membrane protein; PFAM: Cytochrome c; Protein of unknown function (DUF989). (398 aa)
msrQPutative membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, usin [...] (210 aa)
Sps_01258nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit; 'PFAM: NapC/NirT cytochrome c family, N-terminal region'; 'TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family'. (196 aa)
Sps_01428PFAM: Cytochrome c; Di-haem cytochrome c peroxidase. (329 aa)
Sps_01542PFAM: Cytochrome C'. (147 aa)
Sps_01631Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
Sps_01708Hypothetical protein. (227 aa)
Sps_01734Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (330 aa)
Sps_01898Decaheme c-type cytochrome, DmsE family; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); Cytochrome c7; 'TIGRFAM: decaheme c-type cytochrome, DmsE family; doubled CXXCH domain'. (321 aa)
Sps_01900PFAM: Cytochrome c7; 'TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family'. (641 aa)
Sps_01901PFAM: Cytochrome c554 and c-prime; 'TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family'. (719 aa)
Sps_01904Decaheme c-type cytochrome, DmsE family; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); Cytochrome c554 and c-prime; 'TIGRFAM: decaheme c-type cytochrome, DmsE family; doubled CXXCH domain'. (333 aa)
kynATryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (281 aa)
Sps_02411PFAM: Cytochrome C'. (153 aa)
Sps_02426ABC-type uncharacterized transport system, permease component; PFAM: Cytochrome C assembly protein. (262 aa)
Sps_02532PFAM: Cytochrome c. (110 aa)
Sps_02534Sulfite dehydrogenase (cytochrome) subunit SorB. (125 aa)
Sps_02535PFAM: Cytochrome c. (135 aa)
Sps_02598PFAM: Di-haem cytochrome c peroxidase. (516 aa)
nrfARespiratory nitrite reductase (cytochrome); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (466 aa)
hmpHemoglobin-like flavoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. (413 aa)
cysISulfite reductase (NADPH) beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (577 aa)
Sps_02847PFAM: Catalase; Catalase-related immune-responsive; Belongs to the catalase family. (488 aa)
Sps_02860Truncated hemoglobin; PFAM: Bacterial-like globin. (137 aa)
Sps_02951PFAM: Cytochrome c. (355 aa)
Sps_02952PFAM: Cytochrome c. (177 aa)
Sps_03102Putative periplasmic protein; PFAM: Bacterial transglutaminase-like cysteine proteinase BTLCP. (216 aa)
Sps_03425Cytochrome c, mono- and diheme variants family; 'PFAM: Cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III'. (410 aa)
Sps_03507PFAM: Ethylbenzene dehydrogenase. (347 aa)
Sps_03574TIGR01777 family protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein. (304 aa)
Sps_03581PFAM: Right handed beta helix region; 'TIGRFAM: parallel beta-helix repeat-containing protein; parallel beta-helix repeat (two copies); conserved hypothetical protein, HNE_0200 family'. (879 aa)
Sps_03582'TIGRFAM: conserved hypothetical protein, HNE_0200 family'. (400 aa)
Sps_04034Truncated hemoglobin; PFAM: Bacterial-like globin. (117 aa)
Sps_04081Truncated hemoglobin; PFAM: Bacterial-like globin. (120 aa)
Sps_04168Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; PFAM: Cytochrome c552; Belongs to the cytochrome c-552 family. (462 aa)
Sps_04208Hypothetical protein; 'PFAM: NapC/NirT cytochrome c family, N-terminal region; Cytochrome C1 family'. (159 aa)
Sps_04209Hypothetical protein; 'PFAM: NapC/NirT cytochrome c family, N-terminal region'. (230 aa)
Sps_04464PFAM: Cytochrome P450. (467 aa)
Sps_04568PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family. (335 aa)
apaGUncharacterized protein affecting Mg2+/Co2+ transport; PFAM: Protein of unknown function (DUF525). (126 aa)
Sps_04807Hypothetical protein. (182 aa)
Sps_05040Cytochrome c, mono- and diheme variants family; 'PFAM: Cytochrome C oxidase, cbb3-type, subunit III'. (218 aa)
Sps_05042PFAM: Di-haem cytochrome c peroxidase. (351 aa)
Sps_05074PFAM: Cytochrome C1 family. (240 aa)
nrfA-2Respiratory nitrite reductase (cytochrome); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (469 aa)
Sps_05298'PFAM: Cytochrome C oxidase, cbb3-type, subunit III'. (101 aa)
Sps_05650Cytochrome bo3 quinol oxidase subunit 1 apoprotein; PFAM: Cytochrome C and Quinol oxidase polypeptide I; 'TIGRFAM: cytochrome o ubiquinol oxidase, subunit I'; Belongs to the heme-copper respiratory oxidase family. (661 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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