STRINGSTRING
truA truA Sps_01677 Sps_01677 Sps_01593 Sps_01593 Sps_01582 Sps_01582 Sps_01581 Sps_01581 Sps_01568 Sps_01568 Sps_01547 Sps_01547 Sps_01499 Sps_01499 Sps_01418 Sps_01418 Sps_01381 Sps_01381 Sps_01283 Sps_01283 Sps_01275 Sps_01275 Sps_01225 Sps_01225 Sps_01159 Sps_01159 Sps_01157 Sps_01157 nth nth Sps_05583 Sps_05583 Sps_05552 Sps_05552 Sps_05545 Sps_05545 Sps_05487 Sps_05487 Sps_05455 Sps_05455 Sps_05447 Sps_05447 Sps_05412 Sps_05412 Sps_05397 Sps_05397 Sps_05375 Sps_05375 Sps_05374 Sps_05374 Sps_05355 Sps_05355 Sps_05279 Sps_05279 Sps_05203 Sps_05203 Sps_05172 Sps_05172 Sps_05108 Sps_05108 Sps_05031 Sps_05031 Sps_04999 Sps_04999 Sps_04973 Sps_04973 Sps_04966 Sps_04966 Sps_04963 Sps_04963 Sps_04962 Sps_04962 Sps_04927 Sps_04927 Sps_04910 Sps_04910 Sps_04898 Sps_04898 Sps_04866 Sps_04866 Sps_04729 Sps_04729 Sps_04726 Sps_04726 Sps_04725 Sps_04725 Sps_04722 Sps_04722 Sps_04721 Sps_04721 Sps_00728 Sps_00728 Sps_00832 Sps_00832 Sps_00957 Sps_00957 Sps_00970 Sps_00970 Sps_00993 Sps_00993 Sps_01011 Sps_01011 flgH flgH Sps_00244 Sps_00244 Sps_00284 Sps_00284 Sps_01092 Sps_01092 Sps_00464 Sps_00464 Sps_00520 Sps_00520 Sps_00542 Sps_00542 Sps_00563 Sps_00563 Sps_00592 Sps_00592 Sps_00596 Sps_00596 bamC bamC Sps_00652 Sps_00652 Sps_00698 Sps_00698 Sps_00712 Sps_00712 Sps_00721 Sps_00721 Sps_00724 Sps_00724 Sps_05655 Sps_05655 Sps_05602 Sps_05602 Sps_05594 Sps_05594 Sps_02934 Sps_02934 Sps_02989 Sps_02989 Sps_03026 Sps_03026 Sps_03035 Sps_03035 Sps_03065 Sps_03065 Sps_03066 Sps_03066 Sps_03145 Sps_03145 Sps_03151 Sps_03151 Sps_03158 Sps_03158 Sps_03230 Sps_03230 Sps_03231 Sps_03231 Sps_03254 Sps_03254 Sps_03285 Sps_03285 Sps_03295 Sps_03295 Sps_03378 Sps_03378 Sps_03379 Sps_03379 Sps_03544 Sps_03544 Sps_03561 Sps_03561 Sps_03574 Sps_03574 Sps_03575 Sps_03575 Sps_03584 Sps_03584 Sps_03624 Sps_03624 Sps_03737 Sps_03737 Sps_03746 Sps_03746 flgH-2 flgH-2 mltF mltF bamB bamB Sps_03854 Sps_03854 bamE bamE Sps_03857 Sps_03857 Sps_03876 Sps_03876 Sps_03897 Sps_03897 Sps_03910 Sps_03910 Sps_03968 Sps_03968 Sps_03978 Sps_03978 Sps_03996 Sps_03996 Sps_04011 Sps_04011 Sps_04018 Sps_04018 Sps_04024 Sps_04024 Sps_04053 Sps_04053 Sps_04109 Sps_04109 Sps_04128 Sps_04128 Sps_04144 Sps_04144 Sps_04157 Sps_04157 Sps_04164 Sps_04164 Sps_04205 Sps_04205 Sps_04236 Sps_04236 nqrE-2 nqrE-2 Sps_04316 Sps_04316 Sps_04319 Sps_04319 lolB lolB lptE lptE Sps_04377 Sps_04377 rlpA rlpA bamD bamD Sps_04416 Sps_04416 Sps_04422 Sps_04422 Sps_04443 Sps_04443 Sps_04446 Sps_04446 Sps_04481 Sps_04481 Sps_04493 Sps_04493 Sps_04552 Sps_04552 Sps_04564 Sps_04564 Sps_04595 Sps_04595 Sps_04625 Sps_04625 lptD lptD Sps_02933 Sps_02933 Sps_02914 Sps_02914 Sps_02913 Sps_02913 Sps_02903 Sps_02903 Sps_02891 Sps_02891 Sps_02880 Sps_02880 Sps_02801 Sps_02801 Sps_02786 Sps_02786 Sps_02773 Sps_02773 Sps_02771 Sps_02771 Sps_02739 Sps_02739 glnD-2 glnD-2 Sps_02609 Sps_02609 Sps_02578 Sps_02578 Sps_02542 Sps_02542 Sps_02521 Sps_02521 Sps_02486 Sps_02486 Sps_02372 Sps_02372 Sps_02337 Sps_02337 Sps_02312 Sps_02312 Sps_02271 Sps_02271 nqrE nqrE Sps_02228 Sps_02228 Sps_02221 Sps_02221 Sps_02202 Sps_02202 Sps_02198 Sps_02198 Sps_02191 Sps_02191 Sps_02162 Sps_02162 Sps_02152 Sps_02152 glnD glnD bamA bamA Sps_02101 Sps_02101 Sps_01994 Sps_01994 Sps_01990 Sps_01990 Sps_01937 Sps_01937 Sps_01933 Sps_01933 Sps_01927 Sps_01927 Sps_01905 Sps_01905 Sps_01899 Sps_01899 Sps_01854 Sps_01854 Sps_01853 Sps_01853 Sps_01824 Sps_01824 Sps_01803 Sps_01803 Sps_01778 Sps_01778 Sps_01763 Sps_01763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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truAtRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (261 aa)
Sps_01677Hypothetical protein. (164 aa)
Sps_01593Putative RNA-binding protein; PFAM: ANTAR domain. (179 aa)
Sps_01582PFAM: Curli assembly protein CsgE. (158 aa)
Sps_01581'PFAM: Type VIII secretion system (T8SS), CsgF protein'. (136 aa)
Sps_01568Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (724 aa)
Sps_01547Hypothetical protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. (731 aa)
Sps_01499'PFAM: Carbohydrate-selective porin, OprB family'. (395 aa)
Sps_01418Lytic murein transglycosylase; PFAM: Transglycosylase SLT domain; Putative peptidoglycan binding domain; TIGRFAM: lytic murein transglycosylase B; lytic murein transglycosylase. (395 aa)
Sps_01381PFAM: Outer membrane protein beta-barrel domain. (304 aa)
Sps_01283PFAM: Transglycosylase SLT domain; TIGRFAM: lytic murein transglycosylase. (336 aa)
Sps_01275Autotransporter secretion outer membrane protein TamA; PFAM: Surface antigen variable number repeat; Surface antigen. (602 aa)
Sps_01225PFAM: Copper resistance protein B precursor (CopB). (242 aa)
Sps_01159Hypothetical protein. (1012 aa)
Sps_01157Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (863 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (227 aa)
Sps_05583PFAM: Outer membrane protein beta-barrel domain. (178 aa)
Sps_05552Type III secretion outer membrane pore, YscC/HrcC family; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; 'TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family'. (614 aa)
Sps_05545PFAM: Secretory protein of YscJ/FliF family; 'TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family'. (235 aa)
Sps_05487Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (718 aa)
Sps_05455PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: type II secretion system protein D. (721 aa)
Sps_05447Type II secretion system protein L (GspL); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (397 aa)
Sps_05412Type IV pilus secretin PilQ/competence protein; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ. (681 aa)
Sps_05397PFAM: LppC putative lipoprotein. (629 aa)
Sps_05375Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Surface antigen variable number repeat; Patatin-like phospholipase. (753 aa)
Sps_05374Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Surface antigen variable number repeat; Patatin-like phospholipase. (740 aa)
Sps_05355MSHA-type pilus biogenesis protein MshL; PFAM: Secretin N-terminal domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: pilus (MSHA type) biogenesis protein MshL. (564 aa)
Sps_05279Hypothetical protein. (801 aa)
Sps_05203KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein. (325 aa)
Sps_05172Hypothetical protein. (453 aa)
Sps_05108TIGRFAM: outer membrane protein. (249 aa)
Sps_05031Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (965 aa)
Sps_04999PFAM: Outer membrane protein beta-barrel domain. (205 aa)
Sps_04973Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). (780 aa)
Sps_04966Outer membrane protein (porin); PFAM: Gram-negative porin. (402 aa)
Sps_04963PFAM: Phosphate-selective porin O and P. (392 aa)
Sps_04962Outer membrane receptor for Fe3+-dicitrate; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (732 aa)
Sps_04927PFAM: Gram-negative porin. (358 aa)
Sps_04910PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (715 aa)
Sps_04898Hypothetical protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. (676 aa)
Sps_04866PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (858 aa)
Sps_04729PFAM: Transposase. (227 aa)
Sps_04726Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent copper receptor. (687 aa)
Sps_04725Transposase family protein; PFAM: zinc-finger of transposase IS204/IS1001/IS1096/IS1165; Transposase. (426 aa)
Sps_04722PFAM: Transposase. (299 aa)
Sps_04721PFAM: zinc-finger of transposase IS204/IS1001/IS1096/IS1165. (140 aa)
Sps_00728PFAM: Protein of unknown function (DUF3570). (477 aa)
Sps_00832PFAM: Outer membrane efflux protein; 'TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family'. (477 aa)
Sps_00957Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain. (753 aa)
Sps_00970PFAM: Outer membrane efflux protein. (448 aa)
Sps_00993PFAM: Secretory protein of YscJ/FliF family; 'TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family'. (240 aa)
Sps_01011Type III secretion outer membrane pore, YscC/HrcC family; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; 'TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family'. (491 aa)
flgHFlagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (220 aa)
Sps_00244Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase. (353 aa)
Sps_00284PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (722 aa)
Sps_01092Nucleoside-binding outer membrane protein; 'PFAM: Nucleoside-specific channel-forming protein, Tsx'. (280 aa)
Sps_00464PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (700 aa)
Sps_00520Hypothetical protein. (383 aa)
Sps_00542PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (698 aa)
Sps_00563PFAM: Monomeric isocitrate dehydrogenase; 'TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type'; Belongs to the monomeric-type IDH family. (741 aa)
Sps_00592PFAM: Protein of unknown function (DUF1302). (682 aa)
Sps_00596PFAM: Bacterial NAD-glutamate dehydrogenase. (1612 aa)
bamCBeta-barrel assembly machine subunit BamC; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (375 aa)
Sps_00652PFAM: Gram-negative porin. (393 aa)
Sps_00698Outer membrane protein (porin); PFAM: Gram-negative porin. (357 aa)
Sps_00712PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor. (939 aa)
Sps_00721PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme. (106 aa)
Sps_00724PFAM: Predicted periplasmic protein (DUF2271). (184 aa)
Sps_05655Outer membrane receptor for monomeric catechols; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (718 aa)
Sps_05602PFAM: Outer membrane protein beta-barrel domain. (203 aa)
Sps_05594PFAM: TonB-dependent Receptor Plug Domain; Outer membrane protein beta-barrel family; TIGRFAM: TonB-dependent siderophore receptor. (708 aa)
Sps_02934PFAM: Curli assembly protein CsgE. (131 aa)
Sps_02989Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (685 aa)
Sps_03026PFAM: Outer membrane efflux protein. (447 aa)
Sps_03035PFAM: Surface antigen. (383 aa)
Sps_03065PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (896 aa)
Sps_03066PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain. (1002 aa)
Sps_03145Nucleoside-binding outer membrane protein; 'PFAM: Nucleoside-specific channel-forming protein, Tsx'. (250 aa)
Sps_03151PFAM: Outer membrane protein beta-barrel domain; OmpA family; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. (338 aa)
Sps_03158Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX). (407 aa)
Sps_03230PFAM: Outer membrane protein beta-barrel domain. (196 aa)
Sps_03231PFAM: Outer membrane protein beta-barrel domain. (191 aa)
Sps_03254Hypothetical protein. (566 aa)
Sps_03285Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX). (451 aa)
Sps_03295Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (800 aa)
Sps_03378Hypothetical protein. (60 aa)
Sps_03379Hypothetical protein. (1141 aa)
Sps_03544'PFAM: Bacterial regulatory proteins, tetR family'. (230 aa)
Sps_03561PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (896 aa)
Sps_03574TIGR01777 family protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein. (304 aa)
Sps_03575PFAM: Polyketide cyclase / dehydrase and lipid transport. (217 aa)
Sps_03584PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (894 aa)
Sps_03624PFAM: Polysaccharide biosynthesis/export protein. (357 aa)
Sps_03737CBS domain-containing protein; PFAM: Nucleotidyl transferase; CBS domain. (353 aa)
Sps_03746PFAM: Capsule biosynthesis GfcC; Polysaccharide biosynthesis/export protein; SLBB domain; JUMPstart RNA. (919 aa)
flgH-2Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (228 aa)
mltFPutative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. (480 aa)
bamBBeta-barrel assembly machine subunit BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (395 aa)
Sps_03854PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases. (273 aa)
bamEBeta-barrel assembly machine subunit BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (167 aa)
Sps_03857Oligoketide cyclase/lipid transport protein; PFAM: Polyketide cyclase / dehydrase and lipid transport. (143 aa)
Sps_03876Nucleoside-binding outer membrane protein; 'PFAM: Nucleoside-specific channel-forming protein, Tsx'. (255 aa)
Sps_03897Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (771 aa)
Sps_03910PFAM: Surface antigen. (425 aa)
Sps_03968Hypothetical protein. (932 aa)
Sps_03978Hypothetical protein. (401 aa)
Sps_03996PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor. (904 aa)
Sps_04011'PFAM: Nucleoside-specific channel-forming protein, Tsx'. (251 aa)
Sps_04018'PFAM: Nucleoside-specific channel-forming protein, Tsx'. (251 aa)
Sps_04024Hypothetical protein. (265 aa)
Sps_04053PFAM: Outer membrane protein beta-barrel domain. (291 aa)
Sps_04109MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein. (265 aa)
Sps_04128PFAM: TonB-dependent Receptor Plug Domain; Domain of unknown function (DUF4480); Outer membrane protein beta-barrel family; TIGRFAM: TonB-dependent receptor. (929 aa)
Sps_04144PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (697 aa)
Sps_04157Outer membrane protein V; PFAM: MltA-interacting protein MipA. (286 aa)
Sps_04164Outer membrane protein V; PFAM: MltA-interacting protein MipA. (257 aa)
Sps_04205PFAM: Surface antigen. (403 aa)
Sps_04236Nucleoside-binding outer membrane protein; 'PFAM: Nucleoside-specific channel-forming protein, Tsx'. (275 aa)
nqrE-2NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. (202 aa)
Sps_04316PFAM: Outer membrane protein beta-barrel domain. (187 aa)
Sps_04319PFAM: Outer membrane protein beta-barrel domain. (190 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (209 aa)
lptERare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (164 aa)
Sps_04377PFAM: Transglycosylase SLT domain; TIGRFAM: lytic murein transglycosylase B. (356 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (268 aa)
bamDBeta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (268 aa)
Sps_04416PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (847 aa)
Sps_04422PFAM: Phosphate-selective porin O and P. (446 aa)
Sps_04443Hypothetical protein; PFAM: Dodecin. (68 aa)
Sps_04446Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (758 aa)
Sps_04481Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (678 aa)
Sps_04493PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases. (264 aa)
Sps_04552PFAM: Lipid A 3-O-deacylase (PagL). (182 aa)
Sps_04564Outer membrane phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (345 aa)
Sps_04595PFAM: Pyridoxamine 5'-phosphate oxidase; 'TIGRFAM: PPOX class probable FMN-dependent enzyme, DR_2398 family'. (201 aa)
Sps_04625Outer membrane protein V; PFAM: MltA-interacting protein MipA. (293 aa)
lptDOrganic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (774 aa)
Sps_02933'PFAM: Type VIII secretion system (T8SS), CsgF protein'. (126 aa)
Sps_02914Outer membrane protein (porin); PFAM: Gram-negative porin. (341 aa)
Sps_02913Outer membrane protein (porin); PFAM: Gram-negative porin. (272 aa)
Sps_02903Hypothetical protein. (390 aa)
Sps_02891Hypothetical protein. (449 aa)
Sps_02880Hypothetical protein. (933 aa)
Sps_02801Outer membrane protein V; PFAM: MltA-interacting protein MipA. (505 aa)
Sps_02786Hypothetical protein. (461 aa)
Sps_02773PFAM: Surface antigen. (445 aa)
Sps_02771PFAM: Outer membrane efflux protein. (553 aa)
Sps_02739Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (685 aa)
glnD-2UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (867 aa)
Sps_02609Uncharacterized lipoprotein; PFAM: Protein of unknown function (DUF3897); TIGRFAM: uncharacterized proteobacterial lipoprotein. (197 aa)
Sps_02578Ig-like domain-containing protein; PFAM: Bacterial Ig-like domain (group 2). (1668 aa)
Sps_02542PFAM: Lipoprotein leucine-zipper. (88 aa)
Sps_02521PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (920 aa)
Sps_02486Type II secretory pathway, component PulD; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein. (488 aa)
Sps_02372PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor. (878 aa)
Sps_02337Hypothetical protein. (367 aa)
Sps_02312PFAM: Gram-negative porin. (408 aa)
Sps_02271PFAM: Protein of unknown function (DUF3570). (416 aa)
nqrENADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. (202 aa)
Sps_02228PFAM: Protein of unknown function (DUF3192). (128 aa)
Sps_02221Outer membrane protein (porin); PFAM: Gram-negative porin. (319 aa)
Sps_02202Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (820 aa)
Sps_02198PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (948 aa)
Sps_02191Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (848 aa)
Sps_02162PFAM: Alginate export. (396 aa)
Sps_02152PFAM: Protein of unknown function (DUF3192). (123 aa)
glnDUTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (857 aa)
bamABeta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (827 aa)
Sps_02101Hypothetical protein. (128 aa)
Sps_01994Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (715 aa)
Sps_01990Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX). (399 aa)
Sps_01937PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family. (389 aa)
Sps_01933Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Pyridoxamine 5'-phosphate oxidase; Oxidoreductase NAD-binding domain. (552 aa)
Sps_01927Hypothetical protein. (975 aa)
Sps_01905PFAM: Protein of unknown function (DUF3374); 'TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family'. (703 aa)
Sps_01899PFAM: Protein of unknown function (DUF3374); 'TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family'. (708 aa)
Sps_01854Outer membrane protein (porin); PFAM: Gram-negative porin. (399 aa)
Sps_01853PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (903 aa)
Sps_01824Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA-like transmembrane domain; OmpA family; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. (366 aa)
Sps_01803Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX). (416 aa)
Sps_01778Hypothetical protein. (427 aa)
Sps_01763Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (655 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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