STRINGSTRING
Sps_01770 Sps_01770 Sps_05599 Sps_05599 Sps_05597 Sps_05597 Sps_05157 Sps_05157 Sps_03340 Sps_03340 Sps_02184 Sps_02184 Sps_02069 Sps_02069 Sps_01760 Sps_01760 Sps_01753 Sps_01753 Sps_01431 Sps_01431 Sps_00220 Sps_00220 Sps_00212 Sps_00212
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_01770Peptide arylation enzyme; PFAM: AMP-binding enzyme; AMP-binding enzyme C-terminal domain; 'TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase'. (552 aa)
Sps_05599Siderophore synthetase component; PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family. (610 aa)
Sps_05597Siderophore synthetase component; PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family. (588 aa)
Sps_05157PFAM: Pyocin activator protein PrtN. (83 aa)
Sps_03340Flavin-dependent dehydrogenase; PFAM: FAD binding domain. (420 aa)
Sps_02184Hypothetical protein; 'PFAM: Phosphopantetheine attachment site; Acyl transferase domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain'; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA. (1492 aa)
Sps_02069Hypothetical protein; PFAM: Sulfatase-modifying factor enzyme 1. (344 aa)
Sps_01760Phosphopantetheinyl transferase component of siderophore synthetase; PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily. (229 aa)
Sps_01753Putative membrane protein, required for colicin V production; PFAM: Colicin V production protein. (162 aa)
Sps_01431'PFAM: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily'; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase. (346 aa)
Sps_00220Polyketide synthase family protein; 'PFAM: Phosphopantetheine attachment site; Acyl transferase domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain'. (977 aa)
Sps_00212PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily. (276 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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