STRINGSTRING
Sps_00120 Sps_00120 fliE fliE Sps_00116 Sps_00116 Sps_00115 Sps_00115 Sps_00114 Sps_00114 Sps_00113 Sps_00113 Sps_00108 Sps_00108 Sps_00107 Sps_00107 Sps_00105 Sps_00105 Sps_00104 Sps_00104 Sps_00103 Sps_00103 flgH flgH flgI flgI Sps_00098 Sps_00098 Sps_00091 Sps_00091 Sps_05537 Sps_05537 Sps_05532 Sps_05532 Sps_05019 Sps_05019 Sps_04073 Sps_04073 Sps_03805 Sps_03805 Sps_03804 Sps_03804 Sps_03802 Sps_03802 Sps_03801 Sps_03801 Sps_03800 Sps_03800 Sps_03799 Sps_03799 flgH-2 flgH-2 flgI-2 flgI-2 Sps_03794 Sps_03794 fliE-2 fliE-2 Sps_03783 Sps_03783 Sps_03782 Sps_03782 Sps_03781 Sps_03781 Sps_03780 Sps_03780 Sps_03779 Sps_03779 Sps_03777 Sps_03777 Sps_03776 Sps_03776 Sps_03775 Sps_03775 Sps_03683 Sps_03683 Sps_02492 Sps_02492 Sps_02242 Sps_02242 Sps_02233 Sps_02233 Sps_01651 Sps_01651 Sps_00916 Sps_00916 Sps_00770 Sps_00770 Sps_00719 Sps_00719 Sps_00121 Sps_00121
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00120PFAM: Surface presentation of antigens (SPOA). (292 aa)
fliEPFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE. (112 aa)
Sps_00116Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (570 aa)
Sps_00115Flagellar motor switch protein; PFAM: FliG middle domain; FliG C-terminal domain; FliG N-terminal domain; TIGRFAM: flagellar motor switch protein FliG. (337 aa)
Sps_00114Flagellar biosynthesis/type III secretory pathway protein; PFAM: Flagellar assembly protein FliH. (263 aa)
Sps_00113Flagellar protein export ATPase FliI; 'PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain'; 'TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family'. (444 aa)
Sps_00108Flagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (116 aa)
Sps_00107PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (139 aa)
Sps_00105PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: flagellar hook-basal body protein. (402 aa)
Sps_00104PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar hook-basal body protein. (244 aa)
Sps_00103PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; 'TIGRFAM: flagellar hook-basal body protein; flagellar basal-body rod protein FlgG, Gram-negative bacteria'; Belongs to the flagella basal body rod proteins family. (261 aa)
flgHFlagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (220 aa)
flgIFlagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (377 aa)
Sps_00098Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3. (305 aa)
Sps_00091Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (152 aa)
Sps_05537Multiple antibiotic transporter; PFAM: MarC family integral membrane protein; 'TIGRFAM: membrane protein, MarC family'. (201 aa)
Sps_05532Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (140 aa)
Sps_05019TIGR00153 family protein; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein. (226 aa)
Sps_04073Putative membrane protein; PFAM: SNARE associated Golgi protein. (140 aa)
Sps_03805Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (132 aa)
Sps_03804PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (138 aa)
Sps_03802PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: flagellar hook-basal body protein. (454 aa)
Sps_03801PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: flagellar hook-basal body protein. (455 aa)
Sps_03800PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; Belongs to the flagella basal body rod proteins family. (247 aa)
Sps_03799PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; 'TIGRFAM: flagellar hook-basal body protein; flagellar basal-body rod protein FlgG, Gram-negative bacteria'; Belongs to the flagella basal body rod proteins family. (262 aa)
flgH-2Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (228 aa)
flgI-2Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (363 aa)
Sps_03794Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3. (404 aa)
fliE-2PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE. (114 aa)
Sps_03783Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (567 aa)
Sps_03782Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (345 aa)
Sps_03781Flagellar biosynthesis/type III secretory pathway protein; PFAM: Flagellar assembly protein FliH. (344 aa)
Sps_03780Flagellar protein export ATPase FliI; 'PFAM: ATP synthase alpha/beta family, nucleotide-binding domain'; 'TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family'. (446 aa)
Sps_03779PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ. (148 aa)
Sps_03777Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (173 aa)
Sps_03776Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (344 aa)
Sps_03775Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (127 aa)
Sps_03683PHP family phosphohydrolase, histidinol phosphatase; PFAM: PHP domain. (246 aa)
Sps_02492PFAM: Surface presentation of antigens (SPOA). (70 aa)
Sps_02242Flagellar motor protein; PFAM: OmpA family; Membrane MotB of proton-channel complex MotA/MotB. (325 aa)
Sps_02233PFAM: MarC family integral membrane protein; 'TIGRFAM: membrane protein, MarC family'. (220 aa)
Sps_01651Hypothetical protein. (197 aa)
Sps_00916PFAM: Universal stress protein family. (310 aa)
Sps_00770PFAM: MarC family integral membrane protein; 'TIGRFAM: membrane protein, MarC family'. (210 aa)
Sps_00719Bacterial flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (228 aa)
Sps_00121Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (118 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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