STRINGSTRING
Sps_05053 Sps_05053 Sps_00169 Sps_00169 Sps_00286 Sps_00286 ftsE ftsE ccmA ccmA Sps_00422 Sps_00422 Sps_00438 Sps_00438 Sps_00601 Sps_00601 Sps_00874 Sps_00874 Sps_01349 Sps_01349 Sps_01556 Sps_01556 msbA msbA lolD lolD Sps_01771 Sps_01771 Sps_01772 Sps_01772 Sps_01874 Sps_01874 Sps_01875 Sps_01875 Sps_01942 Sps_01942 pstB pstB Sps_02034 Sps_02034 Sps_02166 Sps_02166 potA potA rbsA rbsA Sps_02863 Sps_02863 uvrA uvrA Sps_03060 Sps_03060 Sps_03098 Sps_03098 Sps_03577 Sps_03577 Sps_03638 Sps_03638 Sps_04134 Sps_04134 Sps_04569 Sps_04569 Sps_04578 Sps_04578 Sps_04667 Sps_04667 Sps_04774 Sps_04774 Sps_04789 Sps_04789 Sps_04895 Sps_04895 hmuV hmuV Sps_04994 Sps_04994 Sps_05024 Sps_05024 Sps_05025 Sps_05025 Sps_05201 Sps_05201 Sps_05207 Sps_05207 Sps_05314 Sps_05314 Sps_05394 Sps_05394 Sps_05494 Sps_05494 Sps_05610 Sps_05610 Sps_05613 Sps_05613 pstB-2 pstB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_05053ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter. (636 aa)
Sps_00169ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter. (239 aa)
Sps_00286ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter. (255 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (231 aa)
ccmAHeme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (215 aa)
Sps_00422ABC-type phosphate/phosphonate transport system, ATPase component; PFAM: ABC transporter. (229 aa)
Sps_00438ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter. (529 aa)
Sps_00601ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter. (639 aa)
Sps_00874ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter. (536 aa)
Sps_01349ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (299 aa)
Sps_01556ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (228 aa)
msbALipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (606 aa)
lolDLipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (236 aa)
Sps_01771ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (562 aa)
Sps_01772ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (550 aa)
Sps_01874'PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region'; 'TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain'; Belongs to the ABC transporter superfamily. (337 aa)
Sps_01875ABC-type antimicrobial peptide transport system, ATPase component; 'PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region'. (275 aa)
Sps_01942ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. (287 aa)
pstBPhosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (272 aa)
Sps_02034ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter. (530 aa)
Sps_02166ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (243 aa)
potASpermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (378 aa)
rbsARibose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (494 aa)
Sps_02863ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (222 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (944 aa)
Sps_03060Type I secretion system ATPase, LssB family; PFAM: ABC transporter; ABC transporter transmembrane region; 'TIGRFAM: type I secretion system ATPase, LssB family'. (710 aa)
Sps_03098Type I secretion system ATPase, LssB family; PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; 'TIGRFAM: type I secretion system ATPase, LssB family'. (724 aa)
Sps_03577Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; PFAM: ABC transporter. (250 aa)
Sps_03638ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (609 aa)
Sps_04134PFAM: ABC transporter; 'TIGRFAM: ATP-binding cassette protein, ChvD family'. (554 aa)
Sps_04569ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain. (342 aa)
Sps_04578Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly; PFAM: ABC transporter; ABC transporter transmembrane region. (589 aa)
Sps_04667Colicin V processing peptidase; PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family. (718 aa)
Sps_04774ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (258 aa)
Sps_04789ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter. (308 aa)
Sps_04895PFAM: ABC transporter; ABC transporter transmembrane region; 'TIGRFAM: ABC transporter, permease/ATP-binding protein'. (634 aa)
hmuVABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (254 aa)
Sps_04994ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (341 aa)
Sps_05024Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC; PFAM: ABC transporter; ABC transporter transmembrane region; 'TIGRFAM: thiol reductant ABC exporter, CydC subunit'. (595 aa)
Sps_05025Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD; PFAM: ABC transporter; ABC transporter transmembrane region; 'TIGRFAM: thiol reductant ABC exporter, CydD subunit'. (601 aa)
Sps_05201ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter. (272 aa)
Sps_05207ABC-type (unclassified) transport system, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter. (243 aa)
Sps_05314ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (318 aa)
Sps_05394PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit. (421 aa)
Sps_05494ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; Belongs to the ABC transporter superfamily. (369 aa)
Sps_05610ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (288 aa)
Sps_05613ABC-type Na+ transport system, ATPase component; PFAM: ABC transporter. (244 aa)
pstB-2Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (249 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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