STRINGSTRING
Sps_00187 Sps_00187 Sps_01414 Sps_01414 Sps_02067 Sps_02067 Sps_02291 Sps_02291 Sps_03216 Sps_03216 Sps_03662 Sps_03662 Sps_04415 Sps_04415 Sps_04562 Sps_04562 Sps_04566 Sps_04566 Sps_04567 Sps_04567 Sps_05073 Sps_05073
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00187'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'. (216 aa)
Sps_01414'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'. (336 aa)
Sps_02067'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'. (256 aa)
Sps_02291'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'; Belongs to the GST superfamily. (222 aa)
Sps_03216'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'; Belongs to the GST superfamily. (208 aa)
Sps_03662Maleylacetoacetate isomerase; 'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'; TIGRFAM: maleylacetoacetate isomerase. (218 aa)
Sps_04415'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'; Belongs to the GST superfamily. (207 aa)
Sps_04562'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'. (285 aa)
Sps_04566'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'. (219 aa)
Sps_04567'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'. (232 aa)
Sps_05073'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'; Belongs to the GST superfamily. (209 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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