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| | Sps_02221 | Outer membrane protein (porin); PFAM: Gram-negative porin. (319 aa) |
| | rpoA | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (329 aa) |
| | secY | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (446 aa) |
| | Sps_00363 | PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: translation elongation factor TU. (303 aa) |
| | Sps_00362 | PFAM: Elongation factor Tu GTP binding domain. (89 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1408 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1343 aa) |
| | secE | Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (123 aa) |
| | tuf | Translation elongation factor TU; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (409 aa) |
| | Sps_00300 | PFAM: AsnC family; AsnC-type helix-turn-helix domain. (146 aa) |
| | Sps_00216 | PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain). (255 aa) |
| | Sps_00191 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; 'TIGRFAM: drug resistance transporter, EmrB/QacA subfamily'. (446 aa) |
| | Sps_01075 | PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase. (317 aa) |
| | Sps_01268 | Hypothetical protein. (109 aa) |
| | Sps_01378 | PFAM: Low molecular weight phosphotyrosine protein phosphatase. (158 aa) |
| | Sps_01407 | PFAM: Major Facilitator Superfamily; 'TIGRFAM: drug resistance transporter, Bcr/CflA subfamily'. (412 aa) |
| | Sps_01451 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_01627 | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (396 aa) |
| | msbA | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (606 aa) |
| | Sps_01667 | Thioredoxin domain-containing protein; PFAM: Thioredoxin; Tetratricopeptide repeat. (281 aa) |
| | Sps_01723 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_01764 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (423 aa) |
| | Sps_01771 | ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (562 aa) |
| | Sps_01772 | ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (550 aa) |
| | Sps_01854 | Outer membrane protein (porin); PFAM: Gram-negative porin. (399 aa) |
| | Sps_01871 | ABC-type dipeptide transport system, periplasmic component; 'PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle'. (545 aa) |
| | Sps_01934 | Putative peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (181 aa) |
| | Sps_02053 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_02063 | PFAM: Protein kinase domain; Leucine rich repeat; Leucine Rich repeats (2 copies). (458 aa) |
| | tpx | Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (165 aa) |
| | Sps_02065 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (202 aa) |
| | Sps_02200 | Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (145 aa) |
| | Sps_02218 | Phosphate ABC transporter substrate-binding protein, PhoT family; PFAM: PBP superfamily domain; TIGRFAM: phosphate binding protein. (323 aa) |
| | Sps_00459 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_02273 | PFAM: AhpC/TSA family. (157 aa) |
| | Sps_02274 | PFAM: von Willebrand factor type A domain. (405 aa) |
| | Sps_02276 | PFAM: TadE-like protein. (145 aa) |
| | Sps_04927 | PFAM: Gram-negative porin. (358 aa) |
| | Sps_04926 | Hypothetical protein. (136 aa) |
| | Sps_04895 | PFAM: ABC transporter; ABC transporter transmembrane region; 'TIGRFAM: ABC transporter, permease/ATP-binding protein'. (634 aa) |
| | Sps_04839 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_04824 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_04812 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_04800 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (398 aa) |
| | Sps_04713 | Hypothetical protein. (840 aa) |
| | Sps_04703 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_04691 | Hypothetical protein. (137 aa) |
| | Sps_04524 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_04512 | Hypothetical protein. (291 aa) |
| | Sps_04502 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; 'TIGRFAM: drug resistance transporter, Bcr/CflA subfamily'. (426 aa) |
| | Sps_04469 | Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family. (186 aa) |
| | Sps_04387 | Hypothetical protein. (97 aa) |
| | Sps_04323 | Na+/melibiose symporter-like transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: AmpG-like permease. (473 aa) |
| | Sps_04315 | Acid phosphatase; PFAM: Phosphoesterase family; 'TIGRFAM: acid phosphatase, Burkholderia-type; Tat (twin-arginine translocation) pathway signal sequence'. (565 aa) |
| | Sps_04294 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (156 aa) |
| | Sps_04293 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (155 aa) |
| | Sps_04287 | PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (386 aa) |
| | Sps_04268 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (205 aa) |
| | secD-2 | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (604 aa) |
| | secF-2 | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (315 aa) |
| | Sps_04252 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (114 aa) |
| | Sps_04206 | Hypothetical protein. (164 aa) |
| | Sps_04161 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_04151 | PFAM: Major Facilitator Superfamily; 'TIGRFAM: drug resistance transporter, Bcr/CflA subfamily'. (393 aa) |
| | Sps_04125 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (380 aa) |
| | Sps_04081 | Truncated hemoglobin; PFAM: Bacterial-like globin. (120 aa) |
| | Sps_04034 | Truncated hemoglobin; PFAM: Bacterial-like globin. (117 aa) |
| | Sps_03978 | Hypothetical protein. (401 aa) |
| | Sps_03943 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_03863 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_03712 | PFAM: Chaperone of endosialidase. (458 aa) |
| | Sps_03708 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_03661 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (113 aa) |
| | Sps_03659 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (412 aa) |
| | Sps_03653 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (432 aa) |
| | Sps_03638 | ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (609 aa) |
| | secD | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (605 aa) |
| | secF | Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (315 aa) |
| | ndk | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (143 aa) |
| | Sps_03529 | Transcriptional regulator; PFAM: AsnC family; AsnC-type helix-turn-helix domain. (152 aa) |
| | Sps_03504 | Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (169 aa) |
| | Sps_03495 | Hypothetical protein. (124 aa) |
| | Sps_03494 | Hypothetical protein. (311 aa) |
| | Sps_03493 | PFAM: Putative toxin 43. (187 aa) |
| | Sps_03474 | PFAM: Putative toxin 43. (678 aa) |
| | Sps_03390 | Hypothetical protein. (76 aa) |
| | Sps_03387 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (94 aa) |
| | secA | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (907 aa) |
| | Sps_03193 | PFAM: Redoxin. (165 aa) |
| | Sps_03163 | PFAM: Major Facilitator Superfamily; 'TIGRFAM: drug resistance transporter, EmrB/QacA subfamily'. (530 aa) |
| | Sps_03121 | Putative Zn-dependent hydrolase of beta-lactamase fold; PFAM: Beta-lactamase superfamily domain. (353 aa) |
| | Sps_03117 | PFAM: Winged helix-turn-helix DNA-binding; AsnC family. (158 aa) |
| | Sps_03096 | Flp pilus assembly protein TadG; PFAM: TadE-like protein. (155 aa) |
| | Sps_03095 | PFAM: TadE-like protein. (158 aa) |
| | Sps_03069 | PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family. (108 aa) |
| | Sps_02963 | PFAM: TadE-like protein. (167 aa) |
| | Sps_02961 | PFAM: Putative Flp pilus-assembly TadE/G-like. (504 aa) |
| | Sps_02936 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (455 aa) |
| | Sps_02914 | Outer membrane protein (porin); PFAM: Gram-negative porin. (341 aa) |
| | Sps_02913 | Outer membrane protein (porin); PFAM: Gram-negative porin. (272 aa) |
| | Sps_02904 | Hypothetical protein. (147 aa) |
| | Sps_02903 | Hypothetical protein. (390 aa) |
| | Sps_02891 | Hypothetical protein. (449 aa) |
| | Sps_02890 | Hypothetical protein. (141 aa) |
| | Sps_02869 | 'PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle'. (564 aa) |
| | Sps_02860 | Truncated hemoglobin; PFAM: Bacterial-like globin. (137 aa) |
| | Sps_02793 | Peroxiredoxin; PFAM: AhpC/TSA family. (174 aa) |
| | Sps_02786 | Hypothetical protein. (461 aa) |
| | Sps_02707 | Hypothetical protein. (883 aa) |
| | Sps_02623 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_02604 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (263 aa) |
| | Sps_02585 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (398 aa) |
| | Sps_02579 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (156 aa) |
| | Sps_02578 | Ig-like domain-containing protein; PFAM: Bacterial Ig-like domain (group 2). (1668 aa) |
| | Sps_02312 | PFAM: Gram-negative porin. (408 aa) |
| | Sps_01073 | Transcriptional regulator; PFAM: Winged helix-turn-helix DNA-binding; AsnC family. (168 aa) |
| | Sps_01060 | PFAM: Major Facilitator Superfamily; 'TIGRFAM: drug resistance transporter, Bcr/CflA subfamily'. (419 aa) |
| | Sps_00899 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_00897 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (156 aa) |
| | Sps_00896 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (160 aa) |
| | Sps_00853 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_00851 | PFAM: A nuclease family of the HNH/ENDO VII superfamily with conserved AHH. (703 aa) |
| | Sps_00842 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; 'TIGRFAM: drug resistance transporter, Bcr/CflA subfamily'. (415 aa) |
| | Sps_00828 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein. (411 aa) |
| | Sps_00791 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme. (536 aa) |
| | msrA | methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (159 aa) |
| | Sps_00748 | PFAM: TadE-like protein. (152 aa) |
| | Sps_00747 | PFAM: TadE-like protein. (156 aa) |
| | Sps_00746 | PFAM: Putative Flp pilus-assembly TadE/G-like. (436 aa) |
| | Sps_00698 | Outer membrane protein (porin); PFAM: Gram-negative porin. (357 aa) |
| | Sps_00652 | PFAM: Gram-negative porin. (393 aa) |
| | Sps_00651 | Phosphate ABC transporter substrate-binding protein, PhoT family. (139 aa) |
| | Sps_00635 | Peroxiredoxin; PFAM: AhpC/TSA family. (154 aa) |
| | Sps_00622 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (193 aa) |
| | Sps_00592 | PFAM: Protein of unknown function (DUF1302). (682 aa) |
| | Sps_00520 | Hypothetical protein. (383 aa) |
| | Sps_00502 | Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family. (201 aa) |
| | Sps_05643 | Phosphate ABC transporter substrate-binding protein, PhoT family; PFAM: PBP superfamily domain; TIGRFAM: phosphate binding protein. (269 aa) |
| | Sps_05598 | PFAM: Major Facilitator Superfamily. (405 aa) |
| | Sps_05472 | Ferritin-like protein; Iron-storage protein. (175 aa) |
| | Sps_05378 | Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (625 aa) |
| | Sps_05320 | PFAM: Major Facilitator Superfamily. (411 aa) |
| | Sps_05228 | Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (390 aa) |
| | Sps_05199 | PFAM: mce related protein. (154 aa) |
| | Sps_05006 | PFAM: Domain of unknown function (DUF4347). (217 aa) |
| | Sps_04966 | Outer membrane protein (porin); PFAM: Gram-negative porin. (402 aa) |
| | Sps_04963 | PFAM: Phosphate-selective porin O and P. (392 aa) |
| | Sps_04954 | Transposase family protein; PFAM: Transposase DDE domain. (380 aa) |
| | Sps_04940 | PFAM: Winged helix-turn-helix DNA-binding; AsnC family. (153 aa) |
| | Sps_04930 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (189 aa) |
