STRINGSTRING
Sps_04268 Sps_04268 Sps_03661 Sps_03661 Sps_01416 Sps_01416 tig tig Sps_02384 Sps_02384 Sps_02408 Sps_02408 Sps_02579 Sps_02579 Sps_02604 Sps_02604
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_04268PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (205 aa)
Sps_03661PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (113 aa)
Sps_01416PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (160 aa)
tigTrigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (434 aa)
Sps_02384PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (140 aa)
Sps_02408PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (210 aa)
Sps_02579PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (156 aa)
Sps_02604PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase. (263 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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