STRINGSTRING
Sps_00641 Sps_00641 Sps_03037 Sps_03037 Sps_02828 Sps_02828 Sps_04041 Sps_04041 Sps_04599 Sps_04599 Sps_05403 Sps_05403 Sps_05264 Sps_05264 Sps_05261 Sps_05261 Sps_04952 Sps_04952 Sps_04857 Sps_04857 Sps_03130 Sps_03130 Sps_04433 Sps_04433 Sps_04197 Sps_04197 Sps_04178 Sps_04178 Sps_04632 Sps_04632 Sps_04142 Sps_04142 Sps_01426 Sps_01426 Sps_00175 Sps_00175 Sps_01254 Sps_01254 Sps_01326 Sps_01326 Sps_00479 Sps_00479 Sps_01726 Sps_01726 Sps_00977 Sps_00977 Sps_01828 Sps_01828 Sps_02529 Sps_02529 Sps_00900 Sps_00900 Sps_00797 Sps_00797 Sps_00673 Sps_00673
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00641Periplasmic component of amino acid ABC-type transporter/signal transduction system; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (268 aa)
Sps_03037HD-GYP domain-containing protein; 'PFAM: HD domain; HAMP domain; Bacterial extracellular solute-binding proteins, family 3'. (1065 aa)
Sps_02828Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (271 aa)
Sps_04041Hypothetical protein. (281 aa)
Sps_04599Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (239 aa)
Sps_05403'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (253 aa)
Sps_05264Periplasmic component of amino acid ABC-type transporter/signal transduction system; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (239 aa)
Sps_05261Periplasmic component of amino acid ABC-type transporter/signal transduction system; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (274 aa)
Sps_04952Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (255 aa)
Sps_04857Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (273 aa)
Sps_03130Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (276 aa)
Sps_04433Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (273 aa)
Sps_04197Periplasmic component of amino acid ABC-type transporter/signal transduction system; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (266 aa)
Sps_04178Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (273 aa)
Sps_04632Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (242 aa)
Sps_04142Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (252 aa)
Sps_01426Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (243 aa)
Sps_00175Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (247 aa)
Sps_01254Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (246 aa)
Sps_01326Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (295 aa)
Sps_00479Periplasmic component of amino acid ABC-type transporter/signal transduction system; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (247 aa)
Sps_01726Periplasmic component of amino acid ABC-type transporter/signal transduction system; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (261 aa)
Sps_00977Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (268 aa)
Sps_01828Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (263 aa)
Sps_02529Amino acid ABC transporter substrate-binding protein, PAAT family; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (273 aa)
Sps_00900periplasmic/7TM domain sensor diguanylate cyclase; 'PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3'; TIGRFAM: diguanylate cyclase (GGDEF) domain. (479 aa)
Sps_00797'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (235 aa)
Sps_00673Periplasmic component of amino acid ABC-type transporter/signal transduction system; 'PFAM: Bacterial extracellular solute-binding proteins, family 3'. (250 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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