STRINGSTRING
Sps_04593 Sps_04593 Sps_04613 Sps_04613 Sps_00233 Sps_00233 Sps_00274 Sps_00274 Sps_00477 Sps_00477 Sps_01431 Sps_01431 Sps_00676 Sps_00676 Sps_03388 Sps_03388 Sps_01955 Sps_01955
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_04593Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (139 aa)
Sps_04613Lactoylglutathione lyase family protein; PFAM: Glyoxalase-like domain. (141 aa)
Sps_00233Putative dioxygenase of extradiol dioxygenase family; PFAM: Iron-containing redox enzyme; Glyoxalase-like domain. (439 aa)
Sps_00274Lactoylglutathione lyase family protein; PFAM: Glyoxalase-like domain. (275 aa)
Sps_00477Lactoylglutathione lyase family protein; PFAM: Glyoxalase-like domain. (116 aa)
Sps_01431'PFAM: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily'; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase. (346 aa)
Sps_00676Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (134 aa)
Sps_03388Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase-like domain. (121 aa)
Sps_01955Lactoylglutathione lyase family protein; PFAM: Glyoxalase-like domain. (127 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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