STRINGSTRING
Sps_03781 Sps_03781 Sps_00114 Sps_00114 Sps_05543 Sps_05543
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_03781Flagellar biosynthesis/type III secretory pathway protein; PFAM: Flagellar assembly protein FliH. (344 aa)
Sps_00114Flagellar biosynthesis/type III secretory pathway protein; PFAM: Flagellar assembly protein FliH. (263 aa)
Sps_05543PFAM: Nodulation protein NolV; 'TIGRFAM: type III secretion apparatus protein, HrpE/YscL family'. (209 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.