STRINGSTRING
Sps_00596 Sps_00596 Sps_00650 Sps_00650 Sps_01259 Sps_01259 napA napA Sps_01298 Sps_01298 Sps_01590 Sps_01590 Sps_01591 Sps_01591 Sps_01592 Sps_01592 hcp hcp Sps_02457 Sps_02457 Sps_02458 Sps_02458 Sps_02560 Sps_02560 nrfA nrfA napA-2 napA-2 Sps_02873 Sps_02873 Sps_03186 Sps_03186 Sps_03213 Sps_03213 Sps_03358 Sps_03358 Sps_04168 Sps_04168 nrfA-2 nrfA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00596PFAM: Bacterial NAD-glutamate dehydrogenase. (1612 aa)
Sps_00650Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (205 aa)
Sps_01259Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (151 aa)
napAPeriplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (829 aa)
Sps_01298'PFAM: Glutamine synthetase, catalytic domain'. (459 aa)
Sps_01590PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator). (489 aa)
Sps_01591PFAM: Rieske-like [2Fe-2S] domain; 'TIGRFAM: nitrite reductase [NAD(P)H], small subunit'. (115 aa)
Sps_01592Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; 'TIGRFAM: nitrite reductase [NAD(P)H], large subunit'. (879 aa)
hcpHydroxylamine reductase precursor; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (552 aa)
Sps_02457Glutamate synthase (NADPH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. (1482 aa)
Sps_02458Glutamate synthase (NADPH) small subunit; 'PFAM: Pyridine nucleotide-disulphide oxidoreductase; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster'; 'TIGRFAM: glutamate synthase small subunit family protein, proteobacterial'. (469 aa)
Sps_02560'PFAM: Glutamine synthetase, catalytic domain'. (449 aa)
nrfARespiratory nitrite reductase (cytochrome); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (466 aa)
napA-2Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (827 aa)
Sps_02873Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (141 aa)
Sps_03186Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase. (311 aa)
Sps_032132-nitropropane dioxygenase-like enzyme; PFAM: Nitronate monooxygenase. (352 aa)
Sps_03358'PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain'; 'TIGRFAM: glutamine synthetase, type I'. (469 aa)
Sps_04168Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; PFAM: Cytochrome c552; Belongs to the cytochrome c-552 family. (462 aa)
nrfA-2Respiratory nitrite reductase (cytochrome); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (469 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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