STRINGSTRING
menF menF Sps_00212 Sps_00212 Sps_01760 Sps_01760 Sps_01765 Sps_01765 Sps_01766 Sps_01766 Sps_01767 Sps_01767 Sps_01769 Sps_01769 Sps_01770 Sps_01770
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
menFIsochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (452 aa)
Sps_00212PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily. (276 aa)
Sps_01760Phosphopantetheinyl transferase component of siderophore synthetase; PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily. (229 aa)
Sps_01765Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Nonribosomal peptide synthase; Condensation domain; TIGRFAM: amino acid adenylation domain. (2056 aa)
Sps_01766Amino acid adenylation enzyme/thioester reductase family protein; 'PFAM: Acyl transferase domain; Methyltransferase domain; AMP-binding enzyme; Nonribosomal peptide synthase; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; Thioesterase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme C-terminal domain'; TIGRFAM: amino acid adenylation domain. (3965 aa)
Sps_01767Thiazolinyl imide reductase; 'PFAM: Oxidoreductase family, NAD-binding Rossmann fold'; TIGRFAM: thiazolinyl imide reductase. (364 aa)
Sps_01769Salicylate synthase; PFAM: chorismate binding enzyme; TIGRFAM: salicylate synthase. (472 aa)
Sps_01770Peptide arylation enzyme; PFAM: AMP-binding enzyme; AMP-binding enzyme C-terminal domain; 'TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase'. (552 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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