STRINGSTRING
Sps_00088 Sps_00088 Sps_00089 Sps_00089 Sps_00115 Sps_00115 Sps_00121 Sps_00121 cheB cheB Sps_00246 Sps_00246 Sps_00247 Sps_00247 Sps_00248 Sps_00248 Sps_00249 Sps_00249 Sps_00250 Sps_00250 Sps_00672 Sps_00672 Sps_01213 Sps_01213 Sps_01303 Sps_01303 Sps_01304 Sps_01304 Sps_01333 Sps_01333 Sps_01421 Sps_01421 Sps_01520 Sps_01520 Sps_01709 Sps_01709 Sps_01748 Sps_01748 Sps_01810 Sps_01810 Sps_02214 Sps_02214 Sps_02242 Sps_02242 Sps_02243 Sps_02243 Sps_02293 Sps_02293 Sps_02313 Sps_02313 Sps_02700 Sps_02700 Sps_02748 Sps_02748 Sps_02811 Sps_02811 Sps_02867 Sps_02867 Sps_02868 Sps_02868 Sps_03198 Sps_03198 Sps_03500 Sps_03500 Sps_03632 Sps_03632 Sps_03757 Sps_03757 Sps_03758 Sps_03758 cheB-2 cheB-2 Sps_03762 Sps_03762 Sps_03763 Sps_03763 Sps_03764 Sps_03764 Sps_03775 Sps_03775 Sps_03776 Sps_03776 Sps_03782 Sps_03782 Sps_03806 Sps_03806 Sps_03807 Sps_03807 Sps_03821 Sps_03821 Sps_03928 Sps_03928 Sps_03944 Sps_03944 Sps_04196 Sps_04196 Sps_04221 Sps_04221 Sps_04264 Sps_04264 Sps_04367 Sps_04367 Sps_04402 Sps_04402 Sps_04440 Sps_04440 Sps_04647 Sps_04647 Sps_05044 Sps_05044 Sps_05098 Sps_05098 Sps_05171 Sps_05171 cheD cheD Sps_05309 Sps_05309 Sps_05503 Sps_05503 Sps_05618 Sps_05618
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00088Flagellar motor protein; PFAM: OmpA family; Membrane MotB of proton-channel complex MotA/MotB. (344 aa)
Sps_00089PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA. (285 aa)
Sps_00115Flagellar motor switch protein; PFAM: FliG middle domain; FliG C-terminal domain; FliG N-terminal domain; TIGRFAM: flagellar motor switch protein FliG. (337 aa)
Sps_00121Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (118 aa)
cheBChemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (346 aa)
Sps_00246Methylase of chemotaxis methyl-accepting protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (312 aa)
Sps_00247PFAM: Methyl-accepting chemotaxis protein (MCP) signalling domain. (1383 aa)
Sps_00248Chemotaxis signal transduction protein; PFAM: CheW-like domain. (191 aa)
Sps_00249CheA signal transduction histidine kinase; 'PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain'. (701 aa)
Sps_00250PFAM: Response regulator receiver domain. (120 aa)
Sps_00672PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (497 aa)
Sps_01213Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (548 aa)
Sps_01303PFAM: CheB methylesterase. (199 aa)
Sps_01304MCP methyltransferase, CheR-type; 'PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain'. (276 aa)
Sps_01333PFAM: Methyl-accepting chemotaxis protein (MCP) signalling domain. (500 aa)
Sps_01421PFAM: CheW-like domain; Response regulator receiver domain. (313 aa)
Sps_01520PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (462 aa)
Sps_01709PFAM: Methyl-accepting chemotaxis protein (MCP) signalling domain. (482 aa)
Sps_01748Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (623 aa)
Sps_01810PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (572 aa)
Sps_02214PFAM: Methyl-accepting chemotaxis protein (MCP) signalling domain. (299 aa)
Sps_02242Flagellar motor protein; PFAM: OmpA family; Membrane MotB of proton-channel complex MotA/MotB. (325 aa)
Sps_02243Flagellar motor component; PFAM: MotA/TolQ/ExbB proton channel family. (255 aa)
Sps_02293Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (721 aa)
Sps_02313Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (626 aa)
Sps_02700Methyl-accepting chemotaxis sensory transducer with TarH sensor; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain; Tar ligand binding domain homologue. (557 aa)
Sps_02748PFAM: Periplasmic binding protein domain. (292 aa)
Sps_02811PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (695 aa)
Sps_02867Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family. (210 aa)
Sps_02868PFAM: Response regulator receiver domain. (118 aa)
Sps_03198Chemotaxis signal transduction protein; PFAM: CheW-like domain; Response regulator receiver domain. (326 aa)
Sps_03500Chemotaxis signal transduction protein; PFAM: CheW-like domain. (171 aa)
Sps_03632Chemotaxis signal transduction protein; PFAM: CheW-like domain; Response regulator receiver domain. (298 aa)
Sps_03757PFAM: CheW-like domain. (163 aa)
Sps_03758PFAM: CheW-like domain. (333 aa)
cheB-2Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (372 aa)
Sps_03762Chemotaxis protein histidine kinase-like protein; 'PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain'. (723 aa)
Sps_03763Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (245 aa)
Sps_03764PFAM: Response regulator receiver domain. (123 aa)
Sps_03775Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (127 aa)
Sps_03776Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (344 aa)
Sps_03782Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (345 aa)
Sps_03806MCP methyltransferase, CheR-type; 'PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain'. (277 aa)
Sps_03807PFAM: CheW-like domain; Response regulator receiver domain. (306 aa)
Sps_03821PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (667 aa)
Sps_03928CheY-like receiver domain-containing protein; PFAM: Response regulator receiver domain. (134 aa)
Sps_03944Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain; Vibrio chemotaxis protein N terminus. (622 aa)
Sps_04196Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; PFAM: Methyl-accepting chemotaxis protein (MCP) signalling domain; PAS fold; TIGRFAM: PAS domain S-box. (514 aa)
Sps_04221Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: Periplasmic binding protein domain. (338 aa)
Sps_04264PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (772 aa)
Sps_04367Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain; Vibrio chemotaxis protein N terminus. (622 aa)
Sps_04402PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (620 aa)
Sps_04440Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (452 aa)
Sps_04647PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (675 aa)
Sps_05044Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (640 aa)
Sps_05098Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; PFAM: Methyl-accepting chemotaxis protein (MCP) signalling domain; PAS fold; TIGRFAM: PAS domain S-box. (525 aa)
Sps_05171Putative inhibitor of MCP methylation, CheC; PFAM: Chemotaxis phosphatase CheX. (154 aa)
cheDChemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (208 aa)
Sps_05309PFAM: Response regulator receiver domain. (265 aa)
Sps_05503PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (632 aa)
Sps_05618PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain. (552 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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