STRINGSTRING
EF_2908 EF_2908 EF_2909 EF_2909 EF_2911 EF_2911 EF_2912 EF_2912 EF_2913 EF_2913 greA greA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EF_2908Glycosyl transferase, group 2 family protein; Similar to SP:P19690, PID:216911, and PID:1575711; identified by sequence similarity; putative. (312 aa)
EF_2909Conserved hypothetical protein; Similar to SP:P35092, and SP:P35093; identified by sequence similarity; putative. (103 aa)
EF_2911DNA-binding response regulator, LuxR family; Similar to GP:5830527, and GP:9501772; identified by sequence similarity; putative. (210 aa)
EF_2912Sensor histidine kinase, putative; Similar to GB:L35044, and PID:516627; identified by sequence similarity; putative. (367 aa)
EF_2913Conserved hypothetical protein; Similar to GP:9501770, and GP:16413478; identified by sequence similarity; putative. (243 aa)
greATranscription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (159 aa)
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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