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sdhB-1 sdhB-1 sdhA-1 sdhA-1 EF_0629 EF_0629 gloA gloA sdhB-2 sdhB-2 sdhA-2 sdhA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sdhB-1L-serine dehydratase, iron-sulfur-dependent, beta subunit; Identified by match to TIGR protein family HMM TIGR01830; Belongs to the iron-sulfur dependent L-serine dehydratase family. (219 aa)
sdhA-1L-serine dehydratase, iron-sulfur-dependent, alpha subunit; Identified by match to PFAM protein family HMM PF03313; Belongs to the iron-sulfur dependent L-serine dehydratase family. (297 aa)
EF_0629Oxidoreductase, aldo/keto reductase family; Identified by match to PFAM protein family HMM PF04222. (279 aa)
gloALactoylglutathione lyase; Similar to SP:P25919, and PID:152706; identified by sequence similarity; putative. (124 aa)
sdhB-2L-serine dehydratase, iron-sulfur-dependent, beta subunit; Identified by match to PFAM protein family HMM PF03315; Belongs to the iron-sulfur dependent L-serine dehydratase family. (222 aa)
sdhA-2L-serine dehydratase, iron-sulfur-dependent, alpha subunit; Identified by match to PFAM protein family HMM PF02776; Belongs to the iron-sulfur dependent L-serine dehydratase family. (290 aa)
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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