STRINGSTRING
SIO13043.1 SIO13043.1 SIO13058.1 SIO13058.1 SIO13065.1 SIO13065.1 SIO13082.1 SIO13082.1 SIO13095.1 SIO13095.1 SIO13104.1 SIO13104.1 SIO13118.1 SIO13118.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIO13043.1Hypothetical protein. (384 aa)
SIO13058.1Hypothetical protein. (395 aa)
SIO13065.1Gluconate 2-dehydrogenase subunit 3. (235 aa)
SIO13082.1Choline dehydrogenase. (580 aa)
SIO13095.1acyl-CoA thioesterase-1. (228 aa)
SIO13104.1Putative ABC transport system ATP-binding protein. (225 aa)
SIO13118.1Putative ABC transport system permease protein. (842 aa)
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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