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BC_3871 BC_3871 cshA cshA BC_0361 BC_0361 BC_2150 BC_2150 BC_2271 BC_2271 BC_2464 BC_2464 BC_4564 BC_4564 rnhC rnhC rph rph cshB cshB xseA xseA xseB xseB BC_2600 BC_2600 BC_2800 BC_2800 BC_2822 BC_2822 BC_2829 BC_2829 BC_2849 BC_2849 BC_3257 BC_3257 BC_3441 BC_3441 BC_3677 BC_3677 rny rny pnp pnp rnhB rnhB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
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gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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BC_3871Protein yicC. (291 aa)
cshAATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity (By similarity). Probably has a somewhat redundant function with cshB, as cshA can partially complement the growth effects of a cshB deletion. Plays a role in adaptation to cold, oxididant and pH stress. (514 aa)
BC_0361Polysaccharide deacetylase. (360 aa)
BC_2150Metal-dependent phosphohydrolase. (215 aa)
BC_2271N-acetylmuramoyl-L-alanine amidase. (332 aa)
BC_2464S-layer protein / Peptidoglycan endo-beta-N-acetylglucosaminidase. (483 aa)
BC_4564Metal-dependent phosphohydrolase. (185 aa)
rnhCRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. (311 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (245 aa)
cshBATP-dependent RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity (By similarity). Probably has a somewhat redundant function with CshA, as cshA can partially complement the growth effects of a cshB deletion. (436 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (452 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (76 aa)
BC_2600N-acetylmuramoyl-L-alanine amidase. (272 aa)
BC_2800Hypothetical Cytosolic Protein. (226 aa)
BC_2822N-acetylmuramoyl-L-alanine amidase. (276 aa)
BC_2829Putative Metal-dependent phosphohydrolase. (213 aa)
BC_2849Cell wall-associated hydrolase. (333 aa)
BC_3257N-acetylmuramoyl-L-alanine amidase. (442 aa)
BC_3441Lysozyme M1 precursor. (245 aa)
BC_3677N-acetylmuramoyl-L-alanine amidase. (348 aa)
rnyHydrolase (HAD superfamily); Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (509 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (712 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (257 aa)
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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