(13 nodes) GTP binding domain network (Aspergillus nidulans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANIA_10170	Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (394 aa)
	ANIA_04080	GTP binding protein, putative (AFU_orthologue AFUA_1G05560). (378 aa)
	ANIA_01666	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (560 aa)
	ANIA_00692	GTP-binding protein (AFU_orthologue AFUA_1G13540). (412 aa)
	ANIA_06522	Mitochondrial GTPase (Mss1), putative (AFU_orthologue AFUA_6G04950). (614 aa)
	ANIA_05865	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (656 aa)
	ANIA_05518	GTP binding protein (EngB), putative (AFU_orthologue AFUA_6G13010). (332 aa)
	ANIA_04708	Mitochondrial GTPase (YlqF), putative (AFU_orthologue AFUA_5G08680). (354 aa)
	ANIA_03328	G domain-containing protein. (419 aa)
	ANIA_02263	Ribosome biogenesis GTPase Lsg1, putative (AFU_orthologue AFUA_5G06510). (650 aa)
	ANIA_02244	GTP binding protein (Gtp1), putative (AFU_orthologue AFUA_5G06770). (367 aa)
	ANIA_01215	Myosin-related protein homolog MlpA. (544 aa)
	ANIA_00889	GTP-binding protein Obg (AFU_orthologue AFUA_1G15500). (555 aa)

Your Current Organism:

Aspergillus nidulans

NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANIA_00692	ANIA_00889	C8VRQ0	Q5BEZ1	GTP-binding protein (AFU_orthologue AFUA_1G13540).	GTP-binding protein Obg (AFU_orthologue AFUA_1G15500).	0.485
ANIA_00692	ANIA_05518	C8VRQ0	Q5B1R2	GTP-binding protein (AFU_orthologue AFUA_1G13540).	GTP binding protein (EngB), putative (AFU_orthologue AFUA_6G13010).	0.426
ANIA_00692	ANIA_06522	C8VRQ0	Q5AYV8	GTP-binding protein (AFU_orthologue AFUA_1G13540).	Mitochondrial GTPase (Mss1), putative (AFU_orthologue AFUA_6G04950).	0.482
ANIA_00889	ANIA_00692	Q5BEZ1	C8VRQ0	GTP-binding protein Obg (AFU_orthologue AFUA_1G15500).	GTP-binding protein (AFU_orthologue AFUA_1G13540).	0.485
ANIA_00889	ANIA_04708	Q5BEZ1	Q5B422	GTP-binding protein Obg (AFU_orthologue AFUA_1G15500).	Mitochondrial GTPase (YlqF), putative (AFU_orthologue AFUA_5G08680).	0.800
ANIA_00889	ANIA_05518	Q5BEZ1	Q5B1R2	GTP-binding protein Obg (AFU_orthologue AFUA_1G15500).	GTP binding protein (EngB), putative (AFU_orthologue AFUA_6G13010).	0.628
ANIA_00889	ANIA_06522	Q5BEZ1	Q5AYV8	GTP-binding protein Obg (AFU_orthologue AFUA_1G15500).	Mitochondrial GTPase (Mss1), putative (AFU_orthologue AFUA_6G04950).	0.657
ANIA_00889	ANIA_10170	Q5BEZ1	C8VSF4	GTP-binding protein Obg (AFU_orthologue AFUA_1G15500).	Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.	0.531
ANIA_01215	ANIA_01666	Q5BE15	C8VNL5	Myosin-related protein homolog MlpA.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.990
ANIA_01215	ANIA_02263	Q5BE15	Q5BB17	Myosin-related protein homolog MlpA.	Ribosome biogenesis GTPase Lsg1, putative (AFU_orthologue AFUA_5G06510).	0.846
ANIA_01215	ANIA_05518	Q5BE15	Q5B1R2	Myosin-related protein homolog MlpA.	GTP binding protein (EngB), putative (AFU_orthologue AFUA_6G13010).	0.672
ANIA_01215	ANIA_05865	Q5BE15	Q5B0R5	Myosin-related protein homolog MlpA.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.999
ANIA_01215	ANIA_06522	Q5BE15	Q5AYV8	Myosin-related protein homolog MlpA.	Mitochondrial GTPase (Mss1), putative (AFU_orthologue AFUA_6G04950).	0.634
ANIA_01666	ANIA_01215	C8VNL5	Q5BE15	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	Myosin-related protein homolog MlpA.	0.990
ANIA_01666	ANIA_02263	C8VNL5	Q5BB17	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	Ribosome biogenesis GTPase Lsg1, putative (AFU_orthologue AFUA_5G06510).	0.791
ANIA_01666	ANIA_04080	C8VNL5	C8V5D0	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	GTP binding protein, putative (AFU_orthologue AFUA_1G05560).	0.422
ANIA_01666	ANIA_05518	C8VNL5	Q5B1R2	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	GTP binding protein (EngB), putative (AFU_orthologue AFUA_6G13010).	0.672
ANIA_01666	ANIA_05865	C8VNL5	Q5B0R5	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.999
ANIA_01666	ANIA_06522	C8VNL5	Q5AYV8	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	Mitochondrial GTPase (Mss1), putative (AFU_orthologue AFUA_6G04950).	0.634
ANIA_02244	ANIA_04080	Q5BB36	C8V5D0	GTP binding protein (Gtp1), putative (AFU_orthologue AFUA_5G06770).	GTP binding protein, putative (AFU_orthologue AFUA_1G05560).	0.642