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HNE_0873 HNE_0873 HNE_2200 HNE_2200 ychF ychF fdxB fdxB HNE_1548 HNE_1548 HNE_1073 HNE_1073 HNE_1068 HNE_1068 HNE_2483 HNE_2483 thrS thrS sdhB sdhB thiS thiS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HNE_0873RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (755 aa)
HNE_2200Putative isoquinoline 1-oxidoreductase, alpha subunit; Identified by similarity to SP:Q51697; match to protein family HMM PF00111; match to protein family HMM PF01799. (152 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa)
fdxBFerredoxin, 2Fe-2S; Identified by similarity to SP:P37098; match to protein family HMM PF00111. (106 aa)
HNE_1548Putative molybdopterin converting factor; Identified by match to protein family HMM PF02597. (79 aa)
HNE_1073Putative xanthine dehydrogenase, iron-sulfur binding subunit; Identified by similarity to SP:P77165; match to protein family HMM PF00111; match to protein family HMM PF01799. (216 aa)
HNE_1068Putative molybdopterin converting factor, subunit 1; Identified by match to protein family HMM PF02597. (82 aa)
HNE_2483Putative isoquinoline 1-oxidoreductase, alpha subunit; Identified by similarity to SP:Q51697; match to protein family HMM PF00111; match to protein family HMM PF01799. (151 aa)
thrSthreonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr). (657 aa)
sdhBSuccinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
thiSThiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683. (70 aa)
Your Current Organism:
Hyphomonas neptunium
NCBI taxonomy Id: 228405
Other names: H. neptunium ATCC 15444, Hyphomonas neptunium ATCC 15444, Hyphomonas neptunium str. ATCC 15444, Hyphomonas neptunium strain ATCC 15444
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