STRINGSTRING
NE0127 NE0127 NE0128 NE0128 NE0318 NE0318 NE0319 NE0319 NE0320 NE0320 NE0321 NE0321 NE0533 NE0533 NE0534 NE0534 NE0535 NE0535 NE0541 NE0541 NE0542 NE0542 NE0546 NE0546 NE0547 NE0547 NE0548 NE0548 NE0549 NE0549 NE0550 NE0550 NE0554 NE0554 NE0555 NE0555 NE0556 NE0556 NE0557 NE0557 NE0558 NE0558 NE0559 NE0559 NE0631 NE0631 NE0632 NE0632 NE0633 NE0633 cobO cobO NE0635 NE0635 NE0636 NE0636 NE0731 NE0731 NE0755 NE0755 NE0756 NE0756 NE0757 NE0757 NE0758 NE0758 NE0816 NE0816 NE0817 NE0817 NE0818 NE0818 NE0978 NE0978 NE0979 NE0979 NE0980 NE0980 NE1041 NE1041 NE1070 NE1070 NE1071 NE1071 NE1072 NE1072 NE1078 NE1078 NE1079 NE1079 NE1083 NE1083 NE1084 NE1084 NE1085 NE1085 NE1086 NE1086 fpvA fpvA NE1088 NE1088 NE1089 NE1089 NE1095 NE1095 NE1096 NE1096 NE1097 NE1097 NE1098 NE1098 NE1099 NE1099 NE1101 NE1101 NE1102 NE1102 fpvA-2 fpvA-2 NE1191 NE1191 NE1192 NE1192 NE1205 NE1205 NE1217 NE1217 fecR fecR NE1530 NE1530 NE1531 NE1531 NE1532 NE1532 NE1617 NE1617 NE1984 NE1984 NE1985 NE1985 NE1986 NE1986 NE1989 NE1989 NE1992 NE1992 NE2124 NE2124 fiu fiu NE2126 NE2126 NE2137 NE2137 NE2138 NE2138 NE2139 NE2139 NE2140 NE2140 NE2141 NE2141 NE2142 NE2142 NE2165 NE2165 NE2432 NE2432 NE2433 NE2433 NE2434 NE2434 fecI fecI NE2485 NE2485 NE2486 NE2486
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NE0127Possible tonB-dependent receptor protein; Pseudogene; it contains at least 2 frameshifts; the parts of the original gene are NE0126, NE0125 and NE0124. (349 aa)
NE0128Probable sigma-70 factor, ECF subfamily. (177 aa)
NE0318Conserved hypothetical protein; COGs COG2932; Belongs to the peptidase S24 family. (265 aa)
NE0319Hypothetical protein. (187 aa)
NE0320GCN5-related N-acetyltransferase. (176 aa)
NE0321TonB-dependent receptor protein. (730 aa)
NE0533Putative sigma-70 factor, ECF subfamily. (196 aa)
NE0534Putative transmembrane sensor. (308 aa)
NE0535TonB-dependent receptor protein. (848 aa)
NE0541Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (166 aa)
NE0542Possible transmembrane sensor. (327 aa)
NE0546TonB-dependent receptor protein. (787 aa)
NE0547Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (199 aa)
NE0548Putative transmembrane sensor. (316 aa)
NE0549TonB-dependent receptor protein. (782 aa)
NE0550Conserved hypothetical protein; COGs COG3182. (410 aa)
NE0554Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (197 aa)
NE0555Possible transmembrane sensor. (309 aa)
NE0556TonB-dependent receptor protein. (781 aa)
NE0557Possible sigma-70 factor, ECF subfamily. (219 aa)
NE0558Putative transcriptional regulator, putative. (343 aa)
NE0559TonB-dependent receptor protein. (799 aa)
NE0631CobN/magnesium chelatase; Pseuso gene; it contains at least 1 frameshift and 1 premature stop; the parts of the original gene are NE0628, NE0629 and NE0630. (180 aa)
NE0632Conserved hypothetical protein. (118 aa)
NE0633Hypothetical protein. (112 aa)
cobOATP:corrinoid adenosyltransferase BtuR/CobO/CobP; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (208 aa)
NE0635Hypothetical protein. (193 aa)
NE0636TonB-dependent receptor protein. (612 aa)
NE0731TonB-dependent receptor protein. (739 aa)
NE0755Conserved hypothetical protein. (110 aa)
NE0756Conserved hypothetical protein; COGs COG0811. (169 aa)
NE0757CobN/magnesium chelatase. (1399 aa)
NE0758TonB-dependent receptor protein. (757 aa)
NE0816TonB-dependent receptor protein. (754 aa)
NE0817Putative transmembrane sensor. (334 aa)
NE0818Putative sigma-70 factor, ECF subfamily. (169 aa)
NE0978TonB-dependent receptor protein. (803 aa)
NE0979Putative transmembrane sensor. (347 aa)
NE0980Putative sigma-70 factor, ECF subfamily. (167 aa)
NE1041Putative transmembrane sensor; NE1039 and NE1040 are 2 parts of a dead gene due to a frameshift. (157 aa)
NE1070Helix-turn-helix motif; Pseudogene, contains 2 premature stop codons, the other part of the gene is NE1068. (322 aa)
NE1071Probable sigma-70 factor, ECF subfamily. (178 aa)
NE1072TonB-dependent receptor protein. (784 aa)
NE1078Putative transmembrane sensor. (347 aa)
NE1079Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
NE1083Hypothetical protein. (114 aa)
NE1084Conserved hypothetical protein; COGs COG3182. (648 aa)
NE1085Putative transmembrane sensor. (337 aa)
NE1086Probable sigma-70 factor, ECF subfamily. (170 aa)
fpvATonB-dependent receptor protein. (833 aa)
NE1088TonB-dependent receptor protein. (817 aa)
NE1089TonB-dependent receptor protein. (731 aa)
NE1095Possible TonB-dependent receptor; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.980) with cleavage site probability 0.732 at residue 24. (343 aa)
NE1096Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
NE1097TonB-dependent receptor protein. (824 aa)
NE1098Putative transmembrane sensor. (328 aa)
NE1099Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (167 aa)
NE1101Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (169 aa)
NE1102Putative transmembrane sensor. (352 aa)
fpvA-2TonB-dependent receptor protein. (801 aa)
NE1191Putative transmembrane sensor. (408 aa)
NE1192Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
NE1205TonB-dependent receptor protein. (755 aa)
NE1217Putative sigma-70 factor, ECF subfamily. (170 aa)
fecRPutative FecR protein. (321 aa)
NE1530Putative signal peptide protein. (412 aa)
NE1531TonB-dependent receptor protein. (708 aa)
NE1532TonB-dependent receptor protein. (707 aa)
NE1617Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (186 aa)
NE1984Putative transmembrane protein. (551 aa)
NE1985Hypothetical protein. (97 aa)
NE1986Hypothetical protein. (88 aa)
NE1989Putative tonB-dependent receptor protein; NE1987 and NE1988 are 2 parts of a dead gene due to a frameshift. (336 aa)
NE1992Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
NE2124TonB-dependent receptor protein. (732 aa)
fiuIron-regulated outer membrane protein. (227 aa)
NE2126Glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal. (361 aa)
NE2137Putative methylamine utilization protein MauG precursor. (426 aa)
NE2138Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (169 aa)
NE2139Putative transmembrane sensor. (320 aa)
NE2140TonB-dependent receptor protein. (765 aa)
NE2141Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (439 aa)
NE2142Hypothetical protein. (104 aa)
NE2165TonB-dependent receptor protein. (850 aa)
NE2432Conserved hypothetical protein; COGs COG3182. (396 aa)
NE2433TonB-dependent receptor protein. (823 aa)
NE2434Putative transmembrane sensor. (338 aa)
fecIProbable fecI Specialized sigma subunits of RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
NE2485Possible TonB-dependent receptor; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.847) with cleavage site probability 0.655 at residue 52. (350 aa)
NE2486Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (213 aa)
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
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