STRINGSTRING
AKH62813.1 AKH62813.1 AKH63836.1 AKH63836.1 AKH64266.1 AKH64266.1 AKH64267.1 AKH64267.1 AKH64268.1 AKH64268.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKH62813.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
AKH63836.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
AKH64266.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (848 aa)
AKH64267.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
AKH64268.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
Your Current Organism:
Photorhabdus thracensis
NCBI taxonomy Id: 230089
Other names: CIP 108426, DSM 15199, NCIMB 13952, P. thracensis, Photorhabdus luminescens subsp. thracensis, Photorhabdus luminescens subsp. thracensis Hazir et al. 2004, Photorhabdus temperata subsp. thracensis, Photorhabdus temperata subsp. thracensis (Hazir et al. 2004) Tailliez et al. 2010, strain 39-8
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