STRINGSTRING
sm9_0308 sm9_0308 trxB trxB sm9_0701 sm9_0701 sm9_0741 sm9_0741 sm9_0830 sm9_0830 gor2 gor2 sm9_1438 sm9_1438 sm9_1608 sm9_1608 sm9_1764 sm9_1764 sm9_1816 sm9_1816 sm9_1819 sm9_1819 grpE grpE dnaK dnaK dnaJ dnaJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sm9_0308Protein disulfide-isomerase thioredoxin-related protein. (134 aa)
trxBThioredoxin-disulfide reductase TrxB. (303 aa)
sm9_0701Hsp70 family protein with protein kinase domain. (1170 aa)
sm9_0741Hypothetical protein. (246 aa)
sm9_0830Thermosome subunit; Belongs to the TCP-1 chaperonin family. (551 aa)
gor2Glutathione-disulfide reductase Gor2. (482 aa)
sm9_1438ATP-dependent protease S16 family; Belongs to the peptidase S16 family. (659 aa)
sm9_1608NADH-dependent flavin oxidoreductase. (331 aa)
sm9_1764Redox-active disulfide protein. (86 aa)
sm9_1816Hypothetical protein. (456 aa)
sm9_1819Heat shock protein Hsp20/alpha crystallin family. (206 aa)
grpEMolecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] (183 aa)
dnaKChaperone protein DnaK; Acts as a chaperone. (627 aa)
dnaJChaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (380 aa)
Your Current Organism:
Methanobrevibacter millerae
NCBI taxonomy Id: 230361
Other names: DSM 16643, M. millerae, Methanobrevibacter millerae Rea et al. 2007, Methanobrevibacter sp. ZA-10, OCM 820, strain ZA-10
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