STRINGSTRING
A0A5C3KF63 A0A5C3KF63 A0A5C3KJF4 A0A5C3KJF4 A0A5C3KLJ0 A0A5C3KLJ0 A0A5C3KPX8 A0A5C3KPX8 A0A5C3KRK5 A0A5C3KRK5 A0A5C3KS63 A0A5C3KS63 A0A5C3KVY1 A0A5C3KVY1 A0A5C3KY40 A0A5C3KY40 A0A5C3KZF0 A0A5C3KZF0 A0A5C3KZV1 A0A5C3KZV1 A0A5C3KZV6 A0A5C3KZV6 A0A5C3L259 A0A5C3L259 ERB1 ERB1 A0A5C3L665 A0A5C3L665 A0A5C3L7B4 A0A5C3L7B4 A0A5C3L7K3 A0A5C3L7K3 A0A5C3L858 A0A5C3L858 A0A5C3L9S5 A0A5C3L9S5 A0A5C3L9T0 A0A5C3L9T0 A0A5C3L9Y9 A0A5C3L9Y9 A0A5C3LAP1 A0A5C3LAP1 A0A5C3LB53 A0A5C3LB53 A0A5C3LB96 A0A5C3LB96 A0A5C3LBX3 A0A5C3LBX3 NOP7 NOP7 A0A5C3LCH9 A0A5C3LCH9 A0A5C3LDP2 A0A5C3LDP2 A0A5C3LEQ6 A0A5C3LEQ6 A0A5C3LKA4 A0A5C3LKA4 A0A5C3LN10 A0A5C3LN10 A0A5C3LNQ7 A0A5C3LNQ7 SPB1 SPB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A5C3KF63Protein MAK16; Belongs to the MAK16 family. (290 aa)
A0A5C3KJF4Ribosomal protein L1. (315 aa)
A0A5C3KLJ0RNA-binding domain-containing protein. (198 aa)
A0A5C3KPX8SURF6-domain-containing protein. (426 aa)
A0A5C3KRK5CP-type G domain-containing protein. (577 aa)
A0A5C3KS63Ribosome biogenesis protein YTM1. (438 aa)
A0A5C3KVY1Puf family RNA-binding protein. (673 aa)
A0A5C3KY40rRNA binding protein. (429 aa)
A0A5C3KZF0Brix-domain-containing protein. (378 aa)
A0A5C3KZV1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (309 aa)
A0A5C3KZV6Brix-domain-containing protein. (371 aa)
A0A5C3L259Ebp2-domain-containing protein. (498 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (759 aa)
A0A5C3L665DEAD-domain-containing protein. (778 aa)
A0A5C3L7B4Uncharacterized protein. (664 aa)
A0A5C3L7K3RNA helicase. (674 aa)
A0A5C3L858Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (465 aa)
A0A5C3L9S5Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (249 aa)
A0A5C3L9T0Uncharacterized protein. (250 aa)
A0A5C3L9Y9NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (678 aa)
A0A5C3LAP1Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (801 aa)
A0A5C3LB53RNA helicase. (677 aa)
A0A5C3LB96Uncharacterized protein. (419 aa)
A0A5C3LBX3Uncharacterized protein. (505 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (611 aa)
A0A5C3LCH960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
A0A5C3LDP2Ribosomal RNA processing protein. (316 aa)
A0A5C3LEQ6Uncharacterized protein. (745 aa)
A0A5C3LKA4Noc2-domain-containing protein. (720 aa)
A0A5C3LN10Ribosome biogenesis protein BRX1. (299 aa)
A0A5C3LNQ7Uncharacterized protein. (230 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (878 aa)
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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