15 items (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT26_015082	WD_REPEATS_REGION domain-containing protein. (669 aa)
	CVT26_003041	Uncharacterized protein. (170 aa)
	CVT26_006327	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (108 aa)
	CVT26_005746	DHC_N1 domain-containing protein. (204 aa)
	CVT26_005148	Uncharacterized protein. (123 aa)
	CVT26_013217	Uncharacterized protein. (166 aa)
	CVT26_000162	Uncharacterized protein. (3430 aa)
	CVT26_006987	Uncharacterized protein. (227 aa)
	CVT26_006188	Uncharacterized protein. (566 aa)
	CVT26_013219	Uncharacterized protein. (133 aa)
	CVT26_013218	DHC_N1 domain-containing protein. (385 aa)
	CVT26_011983	F-box domain-containing protein. (1181 aa)
	CVT26_014977	Uncharacterized protein. (237 aa)
	CVT26_000730	DHC_N1 domain-containing protein. (1170 aa)
	CVT26_009140	CAP-Gly domain-containing protein. (1287 aa)

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_000162	CVT26_000730	A0A409WBN1	A0A409YU71	Uncharacterized protein.	DHC_N1 domain-containing protein.	0.974
CVT26_000162	CVT26_003041	A0A409WBN1	A0A409Y4S5	Uncharacterized protein.	Uncharacterized protein.	0.828
CVT26_000162	CVT26_005746	A0A409WBN1	A0A409XA14	Uncharacterized protein.	DHC_N1 domain-containing protein.	0.967
CVT26_000162	CVT26_006188	A0A409WBN1	A0A409VPS7	Uncharacterized protein.	Uncharacterized protein.	0.958
CVT26_000162	CVT26_006327	A0A409WBN1	A0A409Y0Q4	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.875
CVT26_000162	CVT26_009140	A0A409WBN1	A0A409YRK2	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.885
CVT26_000162	CVT26_013217	A0A409WBN1	A0A409X049	Uncharacterized protein.	Uncharacterized protein.	0.972
CVT26_000162	CVT26_013218	A0A409WBN1	A0A409WZZ6	Uncharacterized protein.	DHC_N1 domain-containing protein.	0.971
CVT26_000162	CVT26_013219	A0A409WBN1	A0A409X000	Uncharacterized protein.	Uncharacterized protein.	0.661
CVT26_000162	CVT26_014977	A0A409WBN1	A0A409YXR2	Uncharacterized protein.	Uncharacterized protein.	0.776
CVT26_000162	CVT26_015082	A0A409WBN1	A0A409YEK2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.971
CVT26_000730	CVT26_000162	A0A409YU71	A0A409WBN1	DHC_N1 domain-containing protein.	Uncharacterized protein.	0.974
CVT26_000730	CVT26_003041	A0A409YU71	A0A409Y4S5	DHC_N1 domain-containing protein.	Uncharacterized protein.	0.828
CVT26_000730	CVT26_006188	A0A409YU71	A0A409VPS7	DHC_N1 domain-containing protein.	Uncharacterized protein.	0.839
CVT26_000730	CVT26_006327	A0A409YU71	A0A409Y0Q4	DHC_N1 domain-containing protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.875
CVT26_000730	CVT26_009140	A0A409YU71	A0A409YRK2	DHC_N1 domain-containing protein.	CAP-Gly domain-containing protein.	0.885
CVT26_000730	CVT26_014977	A0A409YU71	A0A409YXR2	DHC_N1 domain-containing protein.	Uncharacterized protein.	0.776
CVT26_000730	CVT26_015082	A0A409YU71	A0A409YEK2	DHC_N1 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.894
CVT26_003041	CVT26_000162	A0A409Y4S5	A0A409WBN1	Uncharacterized protein.	Uncharacterized protein.	0.828
CVT26_003041	CVT26_000730	A0A409Y4S5	A0A409YU71	Uncharacterized protein.	DHC_N1 domain-containing protein.	0.828