STRINGSTRING
CB0101_02185 CB0101_02185 argH argH dapA dapA rfbB rfbB CB0101_08605 CB0101_08605 thiC thiC CB0101_09290 CB0101_09290 hisB hisB CB0101_09575 CB0101_09575 CB0101_09570 CB0101_09570 CB0101_09550 CB0101_09550 CB0101_09450 CB0101_09450 nth nth aroC aroC CB0101_10080 CB0101_10080 coaBC coaBC CB0101_09765 CB0101_09765 leuC leuC cpcT cpcT pheA pheA cofG cofG CB0101_10905 CB0101_10905 speH speH ppc ppc CB0101_10530 CB0101_10530 rlpA rlpA CB0101_10395 CB0101_10395 CB0101_10390 CB0101_10390 CB0101_11040 CB0101_11040 CB0101_10995 CB0101_10995 aroQ aroQ mutM mutM CB0101_11680 CB0101_11680 hemB hemB CB0101_07005 CB0101_07005 deoC deoC pyrF pyrF fabZ fabZ CB0101_06875 CB0101_06875 CB0101_06930 CB0101_06930 cpcS cpcS ispF ispF nnrE nnrE CB0101_05470 CB0101_05470 larC larC GCA_000179235_01076 GCA_000179235_01076 budA budA CB0101_00140 CB0101_00140 trpA trpA CB0101_00625 CB0101_00625 CB0101_00870 CB0101_00870 CB0101_00815 CB0101_00815 speH-2 speH-2 ubiX ubiX CB0101_01585 CB0101_01585 fba fba CB0101_01755 CB0101_01755 fumC fumC ribA ribA murQ murQ pyrE-2 pyrE-2 ilvA ilvA purK purK aroB aroB CB0101_02765 CB0101_02765 CB0101_03335 CB0101_03335 ilvD ilvD CB0101_03975 CB0101_03975 CB0101_03965 CB0101_03965 hemE hemE folB folB menB menB CB0101_03655 CB0101_03655 hemH hemH CB0101_04900 CB0101_04900 CB0101_04860 CB0101_04860 CB0101_04850 CB0101_04850 cbbL cbbL CB0101_04550 CB0101_04550 CB0101_04525 CB0101_04525 rfbG rfbG gmd gmd queE queE CB0101_07930 CB0101_07930 cynS cynS CB0101_07995 CB0101_07995 moaC moaC acnB acnB CB0101_07560 CB0101_07560 gloA gloA eno eno speA speA trpB trpB menC menC CB0101_14975 CB0101_14975 cpcS-2 cpcS-2 CB0101_14190 CB0101_14190 cobD cobD hisF hisF CB0101_13555 CB0101_13555 trpC trpC hisH hisH GCA_000179235_02825 GCA_000179235_02825 dacA dacA lysA lysA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CB0101_02185Unannotated protein. (360 aa)
argHUnannotated protein. (466 aa)
dapAUnannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (306 aa)
rfbBUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (362 aa)
CB0101_08605Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (352 aa)
thiCUnannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. (459 aa)
CB0101_09290Unannotated protein. (806 aa)
hisBUnannotated protein. (211 aa)
CB0101_09575Unannotated protein. (310 aa)
CB0101_09570Unannotated protein. (157 aa)
CB0101_09550Unannotated protein. (510 aa)
CB0101_09450Unannotated protein. (315 aa)
nthUnannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (217 aa)
aroCUnannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (362 aa)
CB0101_10080Unannotated protein. (203 aa)
coaBCUnannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (417 aa)
CB0101_09765Unannotated protein; Belongs to the LeuD family. (211 aa)
leuCUnannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (469 aa)
cpcTUnannotated protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (197 aa)
pheAUnannotated protein. (291 aa)
cofGUnannotated protein; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil. (331 aa)
CB0101_10905Unannotated protein. (236 aa)
speHUnannotated protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (158 aa)
ppcUnannotated protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (1011 aa)
CB0101_10530Unannotated protein. (506 aa)
rlpAUnannotated protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (177 aa)
CB0101_10395Unannotated protein. (220 aa)
CB0101_10390Unannotated protein. (290 aa)
CB0101_11040Unannotated protein. (324 aa)
CB0101_10995Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (270 aa)
aroQUnannotated protein; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (170 aa)
mutMUnannotated protein; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (294 aa)
CB0101_11680Unannotated protein. (135 aa)
hemBUnannotated protein; Belongs to the ALAD family. (333 aa)
CB0101_07005Unannotated protein. (266 aa)
deoCUnannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (226 aa)
pyrFUnannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (239 aa)
fabZUnannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (142 aa)
CB0101_06875Unannotated protein; Belongs to the phycobilisome linker protein family. (1008 aa)
CB0101_06930Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (431 aa)
cpcSUnannotated protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (161 aa)
ispFUnannotated protein; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (161 aa)
nnrEUnannotated protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] (533 aa)
CB0101_05470Unannotated protein. (158 aa)
larCUnannotated protein; Belongs to the LarC family. (409 aa)
GCA_000179235_01076Unannotated protein. (553 aa)
budAUnannotated protein; Belongs to the alpha-acetolactate decarboxylase family. (284 aa)
CB0101_00140Unannotated protein. (393 aa)
trpAUnannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (270 aa)
CB0101_00625Unannotated protein. (205 aa)
CB0101_00870Unannotated protein. (381 aa)
CB0101_00815Unannotated protein; Belongs to the UbiD family. (480 aa)
speH-2Unannotated protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (138 aa)
ubiXUnannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (199 aa)
CB0101_01585Unannotated protein. (132 aa)
fbaUnannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (357 aa)
CB0101_01755Unannotated protein. (433 aa)
fumCUnannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (458 aa)
ribAUnannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (517 aa)
murQUnannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (303 aa)
pyrE-2Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (495 aa)
ilvAUnannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (527 aa)
purKUnannotated protein; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR); Belongs to the PurK/PurT family. (423 aa)
aroBUnannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (372 aa)
CB0101_02765Unannotated protein. (516 aa)
CB0101_03335Unannotated protein. (483 aa)
ilvDUnannotated protein; Belongs to the IlvD/Edd family. (563 aa)
CB0101_03975Unannotated protein. (149 aa)
CB0101_03965Unannotated protein. (99 aa)
hemEUnannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (352 aa)
folBUnannotated protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (124 aa)
menBUnannotated protein; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). (286 aa)
CB0101_03655Unannotated protein; Belongs to the UbiD family. (290 aa)
hemHUnannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (391 aa)
CB0101_04900Unannotated protein. (84 aa)
CB0101_04860Unannotated protein. (567 aa)
CB0101_04850Unannotated protein. (113 aa)
cbbLUnannotated protein; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (470 aa)
CB0101_04550Unannotated protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes. (237 aa)
CB0101_04525Unannotated protein. (314 aa)
rfbGUnannotated protein. (365 aa)
gmdUnannotated protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (396 aa)
queEUnannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (216 aa)
CB0101_07930Unannotated protein. (219 aa)
cynSUnannotated protein; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (137 aa)
CB0101_07995Unannotated protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (342 aa)
moaCUnannotated protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (165 aa)
acnBUnannotated protein; Belongs to the aconitase/IPM isomerase family. (871 aa)
CB0101_07560Unannotated protein. (200 aa)
gloAUnannotated protein; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. (133 aa)
enoUnannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (430 aa)
speAUnannotated protein; Catalyzes the biosynthesis of agmatine from arginine. (645 aa)
trpBUnannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (441 aa)
menCUnannotated protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (325 aa)
CB0101_14975Unannotated protein. (198 aa)
cpcS-2Unannotated protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (216 aa)
CB0101_14190Unannotated protein. (223 aa)
cobDUnannotated protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (384 aa)
hisFUnannotated protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (257 aa)
CB0101_13555Unannotated protein. (394 aa)
trpCUnannotated protein; Belongs to the TrpC family. (294 aa)
hisHUnannotated protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (208 aa)
GCA_000179235_02825Unannotated protein. (496 aa)
dacAUnannotated protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (278 aa)
lysAUnannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (466 aa)
Your Current Organism:
Synechococcus sp. CB0101
NCBI taxonomy Id: 232348
Other names: S. sp. CB0101
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