Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIS52582.1 | AIS52589.1 | TKV_c14110 | TKV_c14180 | Thiamine pyrophosphokinase. | Putative Zn-dependent protease. | 0.666 |
| AIS52582.1 | AIS52590.1 | TKV_c14110 | TKV_c14190 | Thiamine pyrophosphokinase. | Hypothetical protein. | 0.661 |
| AIS52582.1 | def | TKV_c14110 | TKV_c14210 | Thiamine pyrophosphokinase. | Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.651 |
| AIS52582.1 | fmt | TKV_c14110 | TKV_c14200 | Thiamine pyrophosphokinase. | methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.657 |
| AIS52582.1 | priA | TKV_c14110 | TKV_c14220 | Thiamine pyrophosphokinase. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.634 |
| AIS52582.1 | rlmN | TKV_c14110 | TKV_c14160 | Thiamine pyrophosphokinase. | Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.810 |
| AIS52582.1 | rpe | TKV_c14110 | TKV_c14120 | Thiamine pyrophosphokinase. | Ribulose-phosphate 3-epimerase Rpe; Belongs to the ribulose-phosphate 3-epimerase family. | 0.817 |
| AIS52582.1 | rsgA | TKV_c14110 | TKV_c14130 | Thiamine pyrophosphokinase. | Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.982 |
| AIS52582.1 | rsmB | TKV_c14110 | TKV_c14170 | Thiamine pyrophosphokinase. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.842 |
| AIS52582.1 | sps1 | TKV_c14110 | TKV_c14140 | Thiamine pyrophosphokinase. | Serine/threonine-protein kinase Sps1. | 0.866 |
| AIS52582.1 | stp | TKV_c14110 | TKV_c14150 | Thiamine pyrophosphokinase. | Serine/threonine phosphatase Stp. | 0.819 |
| AIS52589.1 | AIS52582.1 | TKV_c14180 | TKV_c14110 | Putative Zn-dependent protease. | Thiamine pyrophosphokinase. | 0.666 |
| AIS52589.1 | AIS52590.1 | TKV_c14180 | TKV_c14190 | Putative Zn-dependent protease. | Hypothetical protein. | 0.810 |
| AIS52589.1 | def | TKV_c14180 | TKV_c14210 | Putative Zn-dependent protease. | Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.788 |
| AIS52589.1 | fmt | TKV_c14180 | TKV_c14200 | Putative Zn-dependent protease. | methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.788 |
| AIS52589.1 | priA | TKV_c14180 | TKV_c14220 | Putative Zn-dependent protease. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.749 |
| AIS52589.1 | rlmN | TKV_c14180 | TKV_c14160 | Putative Zn-dependent protease. | Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.666 |
| AIS52589.1 | rpe | TKV_c14180 | TKV_c14120 | Putative Zn-dependent protease. | Ribulose-phosphate 3-epimerase Rpe; Belongs to the ribulose-phosphate 3-epimerase family. | 0.666 |
| AIS52589.1 | rsgA | TKV_c14180 | TKV_c14130 | Putative Zn-dependent protease. | Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.666 |
| AIS52589.1 | rsmB | TKV_c14180 | TKV_c14170 | Putative Zn-dependent protease. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.755 |
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