STRINGSTRING
gyrB gyrB AIS51743.1 AIS51743.1 AIS51668.1 AIS51668.1 AIS53518.1 AIS53518.1 AIS53429.1 AIS53429.1 phoR2 phoR2 atoS atoS degS degS phoR1 phoR1 cheA cheA spoIIAB spoIIAB AIS52264.1 AIS52264.1 lytS lytS AIS51931.1 AIS51931.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (633 aa)
AIS51743.1ATPase domain-containing protein. (287 aa)
AIS51668.1Integral membrane sensor signal transduction histidine kinase. (465 aa)
AIS53518.1Signal transduction histidine kinase. (568 aa)
AIS53429.1Signal transduction histidine kinase. (470 aa)
phoR2Alkaline phosphatase synthesis sensor protein PhoR. (393 aa)
atoSSignal transduction histidine-protein kinase AtoS. (461 aa)
degSSignal transduction histidine-protein kinase/phosphatase DegS. (388 aa)
phoR1Alkaline phosphatase synthesis sensor protein PhoR. (456 aa)
cheAChemotaxis protein CheA. (657 aa)
spoIIABAnti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (143 aa)
AIS52264.1Signal transduction histidine kinase. (460 aa)
lytSSensor protein LytS. (579 aa)
AIS51931.1Integral membrane sensor signal transduction histidine kinase. (449 aa)
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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