STRINGSTRING
dacB1 dacB1 dacF dacF dacB2 dacB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dacB1D-alanyl-D-alanine carboxypeptidase DacB; Belongs to the peptidase S11 family. (420 aa)
dacFD-alanyl-D-alanine carboxypeptidase DacF; Belongs to the peptidase S11 family. (380 aa)
dacB2D-alanyl-D-alanine carboxypeptidase DacB; Belongs to the peptidase S11 family. (381 aa)
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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