STRINGSTRING
Acid_1421 Acid_1421 Acid_2899 Acid_2899 Acid_3596 Acid_3596 Acid_5443 Acid_5443 Acid_5444 Acid_5444 Acid_5445 Acid_5445 Acid_6035 Acid_6035 Acid_7627 Acid_7627
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Acid_1421PFAM: glycosyl transferase, family 39; KEGG: aba:Acid345_1201 tetratricopeptide repeat protein. (574 aa)
Acid_2899Hypothetical protein; KEGG: hch:HCH_06378 predicted ATPase. (289 aa)
Acid_3596KEGG: sma:SAV1116 hypothetical protein. (609 aa)
Acid_5443PFAM: glycosyl transferase, family 39; KEGG: sma:SAV1116 hypothetical protein. (540 aa)
Acid_5444PFAM: glycosyl transferase, family 39; KEGG: sma:SAV1116 hypothetical protein. (568 aa)
Acid_5445PFAM: glycosyl transferase, family 39; KEGG: sma:SAV1116 hypothetical protein. (528 aa)
Acid_6035Hypothetical protein; KEGG: ade:Adeh_3627 HNH endonuclease. (174 aa)
Acid_7627KEGG: bte:BTH_I2730 plasmid related protein. (92 aa)
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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