STRINGSTRING
Acid_0669 Acid_0669 Acid_2690 Acid_2690 Acid_2692 Acid_2692 Acid_3122 Acid_3122 Acid_3334 Acid_3334 Acid_3983 Acid_3983 Acid_4577 Acid_4577 Acid_5010 Acid_5010 Acid_5486 Acid_5486 Acid_6602 Acid_6602 Acid_7242 Acid_7242
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Acid_0669TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mba:Mbar_A3461 hypothetical protein. (334 aa)
Acid_2690Hypothetical protein; KEGG: aba:Acid345_1882 40-residue YVTN beta-propeller repeat protein. (385 aa)
Acid_2692KEGG: aba:Acid345_0312 hypothetical protein. (344 aa)
Acid_3122PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor. (518 aa)
Acid_3334TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mma:MM0214 hypothetical protein. (327 aa)
Acid_3983KEGG: aba:Acid345_1165 hypothetical protein. (330 aa)
Acid_4577PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor. (520 aa)
Acid_5010PFAM: Pyrrolo-quinoline quinone; cytochrome c, class I; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor. (597 aa)
Acid_5486TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: aba:Acid345_0312 hypothetical protein. (333 aa)
Acid_6602TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; KEGG: aba:Acid345_3053 hypothetical protein. (827 aa)
Acid_7242TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: aba:Acid345_1165 hypothetical protein. (322 aa)
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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