STRINGSTRING
spoVT spoVT GK1100 GK1100 spoIIGA spoIIGA sigE sigE sigG sigG GK1272 GK1272 spoIVA spoIVA GK2301 GK2301 GK2302 GK2302 GK2303 GK2303 GK2304 GK2304 GK2305 GK2305 GK2306 GK2306 GK2307 GK2307 sigF sigF spoIIAB spoIIAB GK2310 GK2310 spoIIM spoIIM spoIVB spoIVB spoIIIAG spoIIIAG spoIIIAF spoIIIAF spoIIIAE spoIIIAE spoIIIAD spoIIIAD spoIIIAC spoIIIAC spoIIIAB spoIIIAB spoIIIAA spoIIIAA GK2444 GK2444 GK2494 GK2494 GK2495 GK2495 spoIIP spoIIP gpr gpr GK2535 GK2535 GK2981 GK2981 GK3334 GK3334 spoIID spoIID spoIIR spoIIR GK3487 GK3487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
spoVTStage V sporulation protein T (transcriptional regulator). (178 aa)
GK1100Hypothetical conserved protein. (411 aa)
spoIIGAProtease (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. (304 aa)
sigEDNA-directed RNA polymerase sigma-29 factor precursor (sigma-E) (stage II sporulation protein GB); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (239 aa)
sigGDNA-directed RNA polymerase sporulation-specific sigma factor (sigma-G); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (259 aa)
GK1272Hypothetical conserved protein. (80 aa)
spoIVAStage IV sporulation protein A (spore cortex formation and coat assembly); ATPase. Has a role at an early stage in the morphogenesis of the spore coat. (492 aa)
GK2301Stage V sporulation protein AF. (492 aa)
GK2302Stage V sporulation protein AE. (203 aa)
GK2303Sporulation protein. (116 aa)
GK2304Stage V sporulation protein AD. (342 aa)
GK2305Stage V sporulation protein AC. (142 aa)
GK2306Stage V sporulation protein AB. (143 aa)
GK2307Stage V sporulation protein AA. (207 aa)
sigFRNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (250 aa)
spoIIABAnti-sigma F factor (serine kinase) (stage II sporulation protein AB); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (146 aa)
GK2310Anti-sigma F factor antagonist (stage II sporulation protein AA); Belongs to the anti-sigma-factor antagonist family. (116 aa)
spoIIMStage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane. (221 aa)
spoIVBStage IV sporulation protein B. (431 aa)
spoIIIAGStage III sporulation protein AG. (210 aa)
spoIIIAFStage III sporulation protein AF. (203 aa)
spoIIIAEStage III sporulation protein AE. (387 aa)
spoIIIADStage III sporulation protein AD. (128 aa)
spoIIIACStage III sporulation protein AC. (68 aa)
spoIIIABStage III sporulation protein AB. (170 aa)
spoIIIAAStage III sporulation protein AA. (306 aa)
GK2444Stage V sporulation protein AF. (487 aa)
GK2494Stage IV sporulation protein. (395 aa)
GK2495Hypothetical conserved protein. (95 aa)
spoIIPStage II sporulation protein P (septal wall dissolution protein). (399 aa)
gprSpore protease (germination protease precursor); Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. (372 aa)
GK2535RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (237 aa)
GK2981Hypothetical conserved protein. (248 aa)
GK3334Transcriptional regulator of sigma-E/sigma-K-dependent gene (stage III sporulation protein D). (87 aa)
spoIIDStage II sporulation protein D. (343 aa)
spoIIRStage II sporulation protein R (pro-sigma-E processing factor). (295 aa)
GK3487Hypothetical conserved protein. (207 aa)
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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