STRINGSTRING
BKCO1_18000143 BKCO1_18000143 TRM5 TRM5 BKCO1_1000443 BKCO1_1000443 BKCO1_5700011 BKCO1_5700011 BKCO1_1000019 BKCO1_1000019 BKCO1_900037 BKCO1_900037 BKCO1_18000149 BKCO1_18000149 BKCO1_12000187 BKCO1_12000187 BKCO1_600047 BKCO1_600047 BKCO1_200059 BKCO1_200059 BKCO1_500094 BKCO1_500094 BKCO1_6000231 BKCO1_6000231 TRM8 TRM8 BKCO1_31000113 BKCO1_31000113 BKCO1_21000135 BKCO1_21000135 BKCO1_1800045 BKCO1_1800045 BKCO1_5200034 BKCO1_5200034 BKCO1_4400085 BKCO1_4400085 BKCO1_5200010 BKCO1_5200010 TRM82 TRM82
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BKCO1_18000143C-5 cytosine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (645 aa)
TRM5tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (483 aa)
BKCO1_1000443Trna wybutosine-synthesizing protein 2. (589 aa)
BKCO1_5700011Putative methyltransferase tarbp1-like. (1259 aa)
BKCO1_1000019Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (403 aa)
BKCO1_900037Trna (Adenine-n-)-methyltransferase. (440 aa)
BKCO1_18000149Trna (Uracil-o-)-methyltransferase. (629 aa)
BKCO1_12000187Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (890 aa)
BKCO1_600047Rna methylase family protein. (473 aa)
BKCO1_200059Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (700 aa)
BKCO1_500094Trna m g methyltransferase domain containing protein. (447 aa)
BKCO1_6000231Trna methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (575 aa)
TRM8tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (285 aa)
BKCO1_31000113Trna methyltransferase complex gcd14 subunit. (511 aa)
BKCO1_21000135Glutamyl-trna synthetase. (216 aa)
BKCO1_1800045Trna wybutosine-synthesizing protein. (309 aa)
BKCO1_5200034Actin binding protein. (441 aa)
BKCO1_4400085Trna (Uracil-5-)-methyltransferase trm9. (239 aa)
BKCO1_5200010Trm112p-domain-containing protein. (138 aa)
TRM82tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (482 aa)
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.