12 items (Candida albicans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SIN3	Transcriptional regulator. (1411 aa)
	CaO19.808	Rpd3L histone deacetylase complex subunit. (610 aa)
	PHO23	Chromatin modification-related protein. (481 aa)
	CaO19.314	Uncharacterized protein. (999 aa)
	CaO19.5617	PHD domain-containing protein. (479 aa)
	CaO19.6506	PHD-type domain-containing protein. (688 aa)
	UME1	Ume1p. (485 aa)
	RPD3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (480 aa)
	CaO19.1856	Uncharacterized protein. (340 aa)
	RPD31	Histone deacetylase. (577 aa)
	CaO19.3004	FAS1 domain-containing protein CaO19.3004. (410 aa)
	CaO19.4615	RXT2_N domain-containing protein. (318 aa)

Your Current Organism:

Candida albicans

NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CaO19.1856	CaO19.3004	A0A1D8PTA8	Q5AI48	Uncharacterized protein.	FAS1 domain-containing protein CaO19.3004.	0.877
CaO19.1856	CaO19.314	A0A1D8PTA8	A0A1D8PJL2	Uncharacterized protein.	Uncharacterized protein.	0.540
CaO19.1856	CaO19.4615	A0A1D8PTA8	Q5AMN1	Uncharacterized protein.	RXT2_N domain-containing protein.	0.891
CaO19.1856	CaO19.5617	A0A1D8PTA8	A0A1D8PQ51	Uncharacterized protein.	PHD domain-containing protein.	0.883
CaO19.1856	CaO19.6506	A0A1D8PTA8	A0A1D8PR21	Uncharacterized protein.	PHD-type domain-containing protein.	0.817
CaO19.1856	CaO19.808	A0A1D8PTA8	A0A1D8PH30	Uncharacterized protein.	Rpd3L histone deacetylase complex subunit.	0.540
CaO19.1856	PHO23	A0A1D8PTA8	A0A1D8PIP3	Uncharacterized protein.	Chromatin modification-related protein.	0.702
CaO19.1856	RPD3	A0A1D8PTA8	A0A1D8PSA6	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.898
CaO19.1856	RPD31	A0A1D8PTA8	Q5ADP0	Uncharacterized protein.	Histone deacetylase.	0.932
CaO19.1856	SIN3	A0A1D8PTA8	A0A1D8PCC3	Uncharacterized protein.	Transcriptional regulator.	0.941
CaO19.1856	UME1	A0A1D8PTA8	A0A1D8PRH3	Uncharacterized protein.	Ume1p.	0.902
CaO19.3004	CaO19.1856	Q5AI48	A0A1D8PTA8	FAS1 domain-containing protein CaO19.3004.	Uncharacterized protein.	0.877
CaO19.3004	CaO19.4615	Q5AI48	Q5AMN1	FAS1 domain-containing protein CaO19.3004.	RXT2_N domain-containing protein.	0.410
CaO19.3004	CaO19.5617	Q5AI48	A0A1D8PQ51	FAS1 domain-containing protein CaO19.3004.	PHD domain-containing protein.	0.486
CaO19.3004	CaO19.6506	Q5AI48	A0A1D8PR21	FAS1 domain-containing protein CaO19.3004.	PHD-type domain-containing protein.	0.856
CaO19.3004	PHO23	Q5AI48	A0A1D8PIP3	FAS1 domain-containing protein CaO19.3004.	Chromatin modification-related protein.	0.406
CaO19.3004	RPD3	Q5AI48	A0A1D8PSA6	FAS1 domain-containing protein CaO19.3004.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.641
CaO19.3004	RPD31	Q5AI48	Q5ADP0	FAS1 domain-containing protein CaO19.3004.	Histone deacetylase.	0.641
CaO19.3004	UME1	Q5AI48	A0A1D8PRH3	FAS1 domain-containing protein CaO19.3004.	Ume1p.	0.582
CaO19.314	CaO19.1856	A0A1D8PJL2	A0A1D8PTA8	Uncharacterized protein.	Uncharacterized protein.	0.540