STRINGSTRING
PSF2 PSF2 RPO41 RPO41 ORC1 ORC1 CaO19.3019 CaO19.3019 POL32 POL32 CaO19.6247 CaO19.6247 CaO19.2796 CaO19.2796 CDC6 CDC6 CDC54 CDC54 MSH6 MSH6 DPB4 DPB4 RFC5 RFC5 CDC7 CDC7 RFC1 RFC1 MCM3 MCM3 CaO19.1434 CaO19.1434 CaO19.3601 CaO19.3601 CDC47 CDC47 CaO19.6155 CaO19.6155 RAD53 RAD53 POL1 POL1 CaO19.7452 CaO19.7452 PPS1 PPS1 PRI2 PRI2 ORC4 ORC4 CAC2 CAC2 RFC3 RFC3 DUN1 DUN1 CaO19.4030 CaO19.4030 DNA2 DNA2 CaO19.3648 CaO19.3648 TOP1 TOP1 CaO19.3431 CaO19.3431 RFC2 RFC2 CaO19.7033 CaO19.7033 POL3 POL3 CaO19.7197 CaO19.7197 MMS22 MMS22 MCM6 MCM6 POL2 POL2 CDC45 CDC45 DPB2 DPB2 CaO19.7594 CaO19.7594 RFC4 RFC4 SLD5 SLD5 GLC7 GLC7 YBL053 YBL053 CDC46 CDC46 PIF1 PIF1 PSF1 PSF1 CaO19.2369 CaO19.2369 ORC3 ORC3 SUV3 SUV3 SLD2 SLD2 RAD51 RAD51 SMT3 SMT3 CaO19.4441 CaO19.4441 CDC48 CDC48 CaO19.91 CaO19.91 CSM3 CSM3 RPN10 RPN10 MSH3 MSH3 MCM2 MCM2 CaO19.5833 CaO19.5833 MSH2 MSH2 MPH1 MPH1 CDC68 CDC68 ADK1 ADK1 SLX1 SLX1 SGS1 SGS1 CCR4 CCR4 RIM1 RIM1 CaO19.2472 CaO19.2472 NPL4 NPL4 IPI3 IPI3 RFA1 RFA1 CHL1 CHL1 CLF1 CLF1 PSF3 PSF3 RNH35 RNH35 CaO19.1668 CaO19.1668 HYS2 HYS2 MHF1 MHF1 CaO19.1476 CaO19.1476 POL30 POL30 CaO19.5934 CaO19.5934
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSF2DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. Has a role in chromosome segregation (By similarity). (203 aa)
RPO41DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1300 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (805 aa)
CaO19.3019SsDNA-dependent ATPase. (678 aa)
POL32DNA polymerase delta subunit. (403 aa)
CaO19.6247Chromatin-binding protein. (871 aa)
CaO19.2796DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (664 aa)
CDC6Cell division control protein; Belongs to the CDC6/cdc18 family. (481 aa)
CDC54DNA helicase; Belongs to the MCM family. (912 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1214 aa)
DPB4DNA polymerase epsilon noncatalytic subunit. (261 aa)
RFC5Replication factor C subunit 5. (362 aa)
CDC7Serine/threonine protein kinase. (656 aa)
RFC1Replication factor C subunit 1. (888 aa)
MCM3DNA helicase; Belongs to the MCM family. (878 aa)
CaO19.1434Protein kinase activating protein. (716 aa)
CaO19.3601AAA domain-containing protein. (547 aa)
CDC47DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (781 aa)
CaO19.6155DNA ligase. (770 aa)
RAD53Serine/threonine-protein kinase RAD53; Controls S-phase checkpoint as well as G1 and G2 DNA damage checkpoints. Phosphorylates proteins on serine, threonine, and tyrosine. Prevents entry into anaphase and mitotic exit after DNA damage via regulation of the Polo kinase CDC5. (699 aa)
POL1DNA polymerase. (1470 aa)
CaO19.7452SLD3 domain-containing protein. (736 aa)
PPS1Pps1p. (1018 aa)
PRI2DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (543 aa)
ORC4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (564 aa)
CAC2Cac2p. (460 aa)
RFC3Replication factor C subunit 3. (347 aa)
DUN1Serine/threonine protein kinase. (530 aa)
CaO19.4030DNA primase; Belongs to the eukaryotic-type primase small subunit family. (424 aa)
DNA2Bifunctional ATP-dependent DNA helicase/ssDNA endodeoxyribonuclease. (1426 aa)
CaO19.3648ERCC4 domain-containing protein. (587 aa)
TOP1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (780 aa)
CaO19.3431DNA-directed DNA polymerase gamma. (1229 aa)
RFC2Replication factor C subunit 2. (363 aa)
CaO19.7033Tyrosine/serine/threonine protein phosphatase. (1076 aa)
POL3DNA polymerase. (1038 aa)
CaO19.7197Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (745 aa)
MMS22Mms22p. (1704 aa)
MCM6DNA helicase; Belongs to the MCM family. (880 aa)
POL2DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2211 aa)
CDC45DNA replication initiation factor. (579 aa)
DPB2DNA polymerase epsilon noncatalytic subunit. (708 aa)
CaO19.7594Uncharacterized protein. (213 aa)
RFC4Replication factor C subunit 4. (323 aa)
SLD5DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (236 aa)
GLC7Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)
YBL053Topoisomerase 1-associated factor 1; Forms a fork protection complex (FPC) with CSM3 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity). (1263 aa)
CDC46DNA helicase; Belongs to the MCM family. (728 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (906 aa)
PSF1DNA replication complex GINS protein PSF1; The GINS complex plays an essential role in the initiation of DNA replication. (236 aa)
CaO19.2369Origin recognition complex subunit 5. (496 aa)
ORC3Origin recognition complex subunit 3. (682 aa)
SUV3ATP-dependent RNA helicase SUV3, mitochondrial; Required for intron-independent turnover and processing of mitochondrial RNA. It is a key control element in nuclear-mitochondrial interactions (By similarity). Required for embedded hyphal growth, for wild-type respiratory growth, and biofilm development. Required for chlamydospore formation, distinctive morphological feature of the fungal pathogen C.albicans that can be induced to form in oxygen- limited environments and has been reported in clinical specimens. Plays am important role in virulence. (720 aa)
SLD2DNA replication regulator SLD2; Has a role in the initiation of DNA replication. Required at S-phase checkpoint (By similarity); Belongs to the SLD2 family. (354 aa)
RAD51DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (361 aa)
SMT3SUMO family protein. (102 aa)
CaO19.4441Zf-primase domain-containing protein. (598 aa)
CDC48AAA family ATPase; Belongs to the AAA ATPase family. (826 aa)
CaO19.91Uncharacterized protein. (299 aa)
CSM3Chromosome segregation in meiosis protein 3; Forms a fork protection complex (FPC) with TOF1 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity). (316 aa)
RPN10Proteasome regulatory particle base subunit. (279 aa)
MSH3DNA mismatch repair protein MSH3; Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair. MSH3 provides substrate- binding and substrate specificity to the complex. When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs. Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication. After mismatch bindi [...] (1037 aa)
MCM2DNA helicase; Belongs to the MCM family. (903 aa)
CaO19.5833Polyubiquitin-binding protein. (363 aa)
MSH2Mismatch repair ATPase; Component of the post-replicative DNA mismatch repair system (MMR). (873 aa)
MPH1ATP-dependent DNA helicase MPH1; ATP-dependent DNA helicase involved in DNA damage repair by homologous recombination and in genome maintenance. Capable of unwinding D-loops. Plays a role in limiting crossover recombinants during mitotic DNA double-strand break (DSB) repair. Component of a FANCM-MHF complex which promotes gene conversion at blocked replication forks, probably by reversal of the stalled fork. Belongs to the DEAD box helicase family. DEAH subfamily. FANCM sub-subfamily. (1187 aa)
CDC68FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1060 aa)
ADK1Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. Adenylate kinase activity is critical for regulation of the phosphate utilization and the AMP de novo biosynthesis pathways. (249 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (286 aa)
SGS1ATP-dependent DNA helicase. (1189 aa)
CCR4Glucose-repressible alcohol dehydrogenase transcriptional effector; Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth (By similarity); Belongs to [...] (787 aa)
RIM1Rim1p. (143 aa)
CaO19.2472Rtf2 domain-containing protein. (230 aa)
NPL4Nuclear protein localization protein 4; Involved in the import of nuclear-targeted proteins into the nucleus and the export of poly(A) RNA out of the nucleus. Has a role in the endoplasmic reticulum-associated degradation (ERAD) pathway (By similarity); Belongs to the NPL4 family. (598 aa)
IPI3Pre-rRNA-processing protein IPI3; Component of the RIX1 complex required for processing of ITS2 sequences from 35S pre-rRNA. (505 aa)
RFA1Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (624 aa)
CHL1ATP-dependent DNA helicase CHL1; ATP-dependent DNA helicase important for chromosome transmission and normal cell cycle progression in G(2)/M (By similarity). May have a role in changing DNA topology to allow the loading of proteins involved in maintaining sister chromatid cohesion in the vicinity of the centromeres (By similarity). Has a specific role in chromosome segregation during meiosis II (By similarity). (842 aa)
CLF1Pre-mRNA-splicing factor CLF1; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity). (701 aa)
PSF3DNA replication complex GINS protein PSF3; The GINS complex plays an essential role in the initiation of DNA replication. (177 aa)
RNH35Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (431 aa)
CaO19.1668Uncharacterized protein. (623 aa)
HYS2DNA-directed DNA polymerase delta subunit. (474 aa)
MHF1Inner kinetochore subunit MHF1; dsDNA-binding component of a FANCM-MHF complex involved in DNA damage repair and genome maintenance (By similarity). FANCM-MHF promotes gene conversion at blocked replication forks, probably by reversal of the stalled fork (By similarity). Component of the kinetochore, a multiprotein complex that assembles on centromeric DNA and attaches chromosomes to spindle microtubules, mediating chromosome segregation and sister chromatid segregation during meiosis and mitosis. Component of the inner kinetochore constitutive centromere- associated network (CCAN), wh [...] (117 aa)
CaO19.1476mRNA (N6-adenosine)-methyltransferase; Belongs to the MT-A70-like family. (543 aa)
POL30Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
CaO19.5934DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (629 aa)
Your Current Organism:
Candida albicans
NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314
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