24 items (Candida albicans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	CaO19.7673	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (116 aa)
	CaO19.7343	U4/U6-U5 snRNP complex subunit. (458 aa)
	SMD3	Small nuclear ribonucleoprotein Sm D3. (106 aa)
	SNU13	13 kDa ribonucleoprotein-associated protein; Common component of the spliceosome and rRNA processing machinery. In association with the spliceosomal U4/U6.U5 tri-snRNP particle, required for splicing of pre-mRNA. In association with box C/D snoRNPs, required for processing of pre-ribosomal RNA (rRNA) and site-specific 2'-O-methylation of substrate RNAs. Essential for the accumulation and stability of U4 snRNA, U6 snRNA, and box C/D snoRNAs (By similarity). (126 aa)
	CaO19.2621	mRNA splicing protein. (125 aa)
	SMX4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	SNP3	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	LSM6	U4/U6-U5 snRNP complex subunit. (80 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (130 aa)
	A0A1D8PPC8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
	CaO19.4326	U4/U6-U5 snRNP complex subunit. (673 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (146 aa)
	CaO19.3098	ATP-dependent RNA helicase. (1987 aa)
	CaO19.82	U4/U6-U5 snRNP complex subunit. (569 aa)
	SMD2	Small nuclear ribonucleoprotein Sm D2. (112 aa)
	SNU114	U5 snRNP GTPase. (1022 aa)
	A0A1D8PH20	Small nuclear ribonucleoprotein G. (74 aa)
	CaO19.1548	U4/U6-U5 snRNP complex subunit. (242 aa)
	CaO19.2112	mRNA splicing protein. (270 aa)
	CaO19.7256	RNA-binding protein. (77 aa)
	CaO19.6356	U4/U6-U5 snRNP complex subunit. (911 aa)
	CaO19.1975	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (148 aa)
	PRP8	U4/U6-U5 snRNP complex subunit. (2416 aa)
	PRP3	U4/U6-U5 snRNP complex subunit. (446 aa)

Your Current Organism:

Candida albicans

NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D8PH20	A0A1D8PPC8	A0A1D8PH20	A0A1D8PPC8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A0A1D8PH20	CaO19.1548	A0A1D8PH20	A0A1D8PGM6	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.918
A0A1D8PH20	CaO19.1975	A0A1D8PH20	Q5A1M0	Small nuclear ribonucleoprotein G.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.991
A0A1D8PH20	CaO19.2112	A0A1D8PH20	A0A1D8PG11	Small nuclear ribonucleoprotein G.	mRNA splicing protein.	0.721
A0A1D8PH20	CaO19.2621	A0A1D8PH20	A0A1D8PTI0	Small nuclear ribonucleoprotein G.	mRNA splicing protein.	0.999
A0A1D8PH20	CaO19.3098	A0A1D8PH20	A0A1D8PMR5	Small nuclear ribonucleoprotein G.	ATP-dependent RNA helicase.	0.997
A0A1D8PH20	CaO19.4326	A0A1D8PH20	A0A1D8PNL9	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.995
A0A1D8PH20	CaO19.6356	A0A1D8PH20	A0A1D8PFI2	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.998
A0A1D8PH20	CaO19.7256	A0A1D8PH20	A0A1D8PFX4	Small nuclear ribonucleoprotein G.	RNA-binding protein.	0.984
A0A1D8PH20	CaO19.7343	A0A1D8PH20	A0A1D8PU02	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.979
A0A1D8PH20	CaO19.7673	A0A1D8PH20	A0A1D8PUC1	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A0A1D8PH20	CaO19.82	A0A1D8PH20	A0A1D8PHQ5	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.986
A0A1D8PH20	LSM4	A0A1D8PH20	A0A1D8PR50	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.982
A0A1D8PH20	LSM6	A0A1D8PH20	A0A1D8PRP0	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.986
A0A1D8PH20	LSM8	A0A1D8PH20	A0A1D8PNJ9	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.989
A0A1D8PH20	PRP3	A0A1D8PH20	Q5AH86	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.927
A0A1D8PH20	PRP8	A0A1D8PH20	Q5A322	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.998
A0A1D8PH20	SMD2	A0A1D8PH20	A0A1D8PHP3	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A1D8PH20	SMD3	A0A1D8PH20	Q59NQ6	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.999
A0A1D8PH20	SMX4	A0A1D8PH20	A0A1D8PTG5	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.989