17 items (Candida albicans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D8PPC8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
	A0A1D8PNM3	mRNA splicing protein. (127 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (146 aa)
	A0A1D8PN22	Sm domain-containing protein. (91 aa)
	SMD2	Small nuclear ribonucleoprotein Sm D2. (112 aa)
	A0A1D8PH20	Small nuclear ribonucleoprotein G. (74 aa)
	CaO19.7256	RNA-binding protein. (77 aa)
	CaO19.6250	Uncharacterized protein. (347 aa)
	SMD3	Small nuclear ribonucleoprotein Sm D3. (106 aa)
	CaO19.7673	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (116 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (167 aa)
	CaO19.2621	mRNA splicing protein. (125 aa)
	SMX4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	SNP3	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	LSM6	U4/U6-U5 snRNP complex subunit. (80 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (130 aa)
	A0A1D8PNP9	Sm-like protein. (123 aa)

Your Current Organism:

Candida albicans

NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D8PH20	A0A1D8PN22	A0A1D8PH20	A0A1D8PN22	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.981
A0A1D8PH20	A0A1D8PNM3	A0A1D8PH20	A0A1D8PNM3	Small nuclear ribonucleoprotein G.	mRNA splicing protein.	0.999
A0A1D8PH20	A0A1D8PNP9	A0A1D8PH20	A0A1D8PNP9	Small nuclear ribonucleoprotein G.	Sm-like protein.	0.968
A0A1D8PH20	A0A1D8PPC8	A0A1D8PH20	A0A1D8PPC8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A0A1D8PH20	CaO19.2621	A0A1D8PH20	A0A1D8PTI0	Small nuclear ribonucleoprotein G.	mRNA splicing protein.	0.999
A0A1D8PH20	CaO19.7256	A0A1D8PH20	A0A1D8PFX4	Small nuclear ribonucleoprotein G.	RNA-binding protein.	0.984
A0A1D8PH20	CaO19.7673	A0A1D8PH20	A0A1D8PUC1	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A0A1D8PH20	LSM1	A0A1D8PH20	A0A1D8PTV1	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.562
A0A1D8PH20	LSM4	A0A1D8PH20	A0A1D8PR50	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.982
A0A1D8PH20	LSM6	A0A1D8PH20	A0A1D8PRP0	Small nuclear ribonucleoprotein G.	U4/U6-U5 snRNP complex subunit.	0.986
A0A1D8PH20	LSM8	A0A1D8PH20	A0A1D8PNJ9	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.989
A0A1D8PH20	SMD2	A0A1D8PH20	A0A1D8PHP3	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A1D8PH20	SMD3	A0A1D8PH20	Q59NQ6	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.999
A0A1D8PH20	SMX4	A0A1D8PH20	A0A1D8PTG5	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.989
A0A1D8PH20	SNP3	A0A1D8PH20	A0A1D8PSP7	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.986
A0A1D8PN22	A0A1D8PH20	A0A1D8PN22	A0A1D8PH20	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.981
A0A1D8PN22	A0A1D8PNM3	A0A1D8PN22	A0A1D8PNM3	Sm domain-containing protein.	mRNA splicing protein.	0.957
A0A1D8PN22	A0A1D8PNP9	A0A1D8PN22	A0A1D8PNP9	Sm domain-containing protein.	Sm-like protein.	0.898
A0A1D8PN22	CaO19.2621	A0A1D8PN22	A0A1D8PTI0	Sm domain-containing protein.	mRNA splicing protein.	0.956
A0A1D8PN22	CaO19.7256	A0A1D8PN22	A0A1D8PFX4	Sm domain-containing protein.	RNA-binding protein.	0.938