STRINGSTRING
CaO19.53 CaO19.53 GCR3 GCR3 CaO19.4888 CaO19.4888 A0A1D8PF89 A0A1D8PF89 CaO19.6347 CaO19.6347 CaO19.6356 CaO19.6356 CaO19.7256 CaO19.7256 CaO19.7265 CaO19.7265 CaO19.2112 CaO19.2112 CaO19.1548 CaO19.1548 CaO19.5828 CaO19.5828 A0A1D8PH20 A0A1D8PH20 SNU114 SNU114 CaO19.4123 CaO19.4123 CaO19.6866 CaO19.6866 SMD2 SMD2 CaO19.82 CaO19.82 CaO19.2261 CaO19.2261 A0A1D8PK11 A0A1D8PK11 CaO19.6989 CaO19.6989 CaO19.7375 CaO19.7375 SUB2 SUB2 CaO19.4659 CaO19.4659 CaO19.2893 CaO19.2893 CaO19.3098 CaO19.3098 CaO19.3178 CaO19.3178 LSM8 LSM8 CaO19.4326 CaO19.4326 A0A1D8PNM3 A0A1D8PNM3 A0A1D8PNP9 A0A1D8PNP9 PRP22 PRP22 A0A1D8PPC8 A0A1D8PPC8 LSM4 LSM4 CaO19.7139 CaO19.7139 LSM6 LSM6 CaO19.2818 CaO19.2818 SNP3 SNP3 SMX4 SMX4 CaO19.2621 CaO19.2621 CaO19.7343 CaO19.7343 CaO19.7581 CaO19.7581 CaO19.7673 CaO19.7673 SSA1 SSA1 SSA2 SSA2 DBP2 DBP2 TRY2 TRY2 SMD3 SMD3 YHC1 YHC1 CWC15 CWC15 ISY1 ISY1 CaO19.763 CaO19.763 PRP28 PRP28 FGR16 FGR16 CaO19.587 CaO19.587 CaO19.2230 CaO19.2230 CaO19.1975 CaO19.1975 PRP8 PRP8 SSB1 SSB1 LEA1 LEA1 SLT11 SLT11 PRP46 PRP46 RSE1 RSE1 CaO19.3250 CaO19.3250 FAL1 FAL1 PRP45 PRP45 PRP5 PRP5 SLU7 SLU7 CaO19.6740 CaO19.6740 CLF1 CLF1 CaO19.2675 CaO19.2675 PRP3 PRP3 CaO19.1687 CaO19.1687 SNU13 SNU13 CaO19.5865 CaO19.5865 BUD31 BUD31 CEF1 CEF1 CaO19.4724 CaO19.4724
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CaO19.53Uncharacterized protein. (377 aa)
GCR3Gcr3p. (886 aa)
CaO19.4888RRM domain-containing protein. (277 aa)
A0A1D8PF89Uncharacterized protein. (73 aa)
CaO19.6347WD_REPEATS_REGION domain-containing protein. (520 aa)
CaO19.6356U4/U6-U5 snRNP complex subunit. (911 aa)
CaO19.7256RNA-binding protein. (77 aa)
CaO19.7265mRNA splicing protein. (242 aa)
CaO19.2112mRNA splicing protein. (270 aa)
CaO19.1548U4/U6-U5 snRNP complex subunit. (242 aa)
CaO19.5828RRM domain-containing protein. (717 aa)
A0A1D8PH20Small nuclear ribonucleoprotein G. (74 aa)
SNU114U5 snRNP GTPase. (1022 aa)
CaO19.4123Uncharacterized protein. (1608 aa)
CaO19.6866U1 snRNP complex subunit. (347 aa)
SMD2Small nuclear ribonucleoprotein Sm D2. (112 aa)
CaO19.82U4/U6-U5 snRNP complex subunit. (569 aa)
CaO19.2261U2 snRNP complex subunit. (259 aa)
A0A1D8PK11RNA-binding protein. (227 aa)
CaO19.6989RRM domain-containing protein. (107 aa)
CaO19.7375Uncharacterized protein. (204 aa)
SUB2ATP-dependent RNA helicase. (433 aa)
CaO19.4659Uncharacterized protein. (425 aa)
CaO19.2893mRNA splicing protein. (845 aa)
CaO19.3098ATP-dependent RNA helicase. (1987 aa)
CaO19.3178SF3a splicing factor complex subunit. (513 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (146 aa)
CaO19.4326U4/U6-U5 snRNP complex subunit. (673 aa)
A0A1D8PNM3mRNA splicing protein. (127 aa)
A0A1D8PNP9Sm-like protein. (123 aa)
PRP22DEAH-box ATP-dependent RNA helicase. (996 aa)
A0A1D8PPC8Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (130 aa)
CaO19.7139Uncharacterized protein. (132 aa)
LSM6U4/U6-U5 snRNP complex subunit. (80 aa)
CaO19.2818DEAH-box RNA helicase. (1070 aa)
SNP3U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
SMX4U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
CaO19.2621mRNA splicing protein. (125 aa)
CaO19.7343U4/U6-U5 snRNP complex subunit. (458 aa)
CaO19.7581U2 snRNP complex subunit. (471 aa)
CaO19.7673Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (116 aa)
SSA1Heat shock protein SSA1; May play a role in the transport of polypeptides both across the mitochondrial membranes and into the endoplasmic reticulum. (656 aa)
SSA2Heat shock protein SSA2; May play a role in the transport of polypeptides both across the mitochondrial membranes and into the endoplasmic reticulum. (645 aa)
DBP2ATP-dependent RNA helicase DBP2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (562 aa)
TRY2Transcriptional regulator of yeast form adherence 2; Transcription factor required for yeast cell adherence to silicone substrate. (371 aa)
SMD3Small nuclear ribonucleoprotein Sm D3. (106 aa)
YHC1U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (150 aa)
CWC15Pre-mRNA-splicing factor CWC15; Involved in pre-mRNA splicing. (224 aa)
ISY1Pre-mRNA-splicing factor ISY1; Involved in pre-mRNA splicing. (266 aa)
CaO19.763Nuclear cap-binding protein subunit 2. (224 aa)
PRP28Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity). (581 aa)
FGR16U4/U6-U5 snRNP complex subunit. (233 aa)
CaO19.587WD_REPEATS_REGION domain-containing protein. (397 aa)
CaO19.2230U2 snRNP complex subunit. (119 aa)
CaO19.1975Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (148 aa)
PRP8U4/U6-U5 snRNP complex subunit. (2416 aa)
SSB1Hsp70 family ATPase; Belongs to the heat shock protein 70 family. (613 aa)
LEA1U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing. (233 aa)
SLT11Pre-mRNA-splicing factor SLT11; Involved in pre-mRNA splicing. Facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome. Binds to RNA (By similarity). (303 aa)
PRP46Pre-mRNA-splicing factor PRP46; Involved in pre-mRNA splicing and required for cell cycle progression at G2/M. (389 aa)
RSE1Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control. (1219 aa)
CaO19.3250Uncharacterized protein. (602 aa)
FAL1ATP-dependent RNA helicase FAL1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity). Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily. (399 aa)
PRP45Pre-mRNA-processing protein 45; Involved in pre-mRNA splicing. (286 aa)
PRP5Pre-mRNA-processing ATP-dependent RNA helicase PRP5; ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA (By similarity); Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily. (884 aa)
SLU7Pre-mRNA-splicing factor SLU7; Involved in pre-mRNA splicing. (350 aa)
CaO19.6740E3 ubiquitin-protein ligase. (446 aa)
CLF1Pre-mRNA-splicing factor CLF1; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity). (701 aa)
CaO19.2675mRNA-binding U2 snRNP complex subunit. (1094 aa)
PRP3U4/U6-U5 snRNP complex subunit. (446 aa)
CaO19.1687DEAH-box ATP-dependent RNA helicase. (767 aa)
SNU1313 kDa ribonucleoprotein-associated protein; Common component of the spliceosome and rRNA processing machinery. In association with the spliceosomal U4/U6.U5 tri-snRNP particle, required for splicing of pre-mRNA. In association with box C/D snoRNPs, required for processing of pre-ribosomal RNA (rRNA) and site-specific 2'-O-methylation of substrate RNAs. Essential for the accumulation and stability of U4 snRNA, U6 snRNA, and box C/D snoRNAs (By similarity). (126 aa)
CaO19.5865DEAH-box RNA-dependent ATPase. (865 aa)
BUD31U2 snRNP complex subunit. (150 aa)
CEF1Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control. (610 aa)
CaO19.4724U1-type domain-containing protein. (256 aa)
Your Current Organism:
Candida albicans
NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314
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