7 items (Ustilago maydis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UMAG_02966	Chromosome 7, whole genome shotgun sequence. (368 aa)
	UMAG_02903	Chromosome 7, whole genome shotgun sequence. (249 aa)
	UMAG_01595	RPOL4c domain-containing protein. (275 aa)
	UMAG_06156	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1400 aa)
	UMAG_04870	Uncharacterized protein. (559 aa)
	UMAG_10785	Uncharacterized protein. (540 aa)
	UMAG_10166	Putative DNA-directed RNA polymerases I and III subunit protein. (397 aa)

Your Current Organism:

Ustilago maydis

NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UMAG_01595	UMAG_02903	A0A0D1CVH2	A0A0D1CQQ3	RPOL4c domain-containing protein.	Chromosome 7, whole genome shotgun sequence.	0.999
UMAG_01595	UMAG_02966	A0A0D1CVH2	A0A0D1C5R5	RPOL4c domain-containing protein.	Chromosome 7, whole genome shotgun sequence.	0.999
UMAG_01595	UMAG_04870	A0A0D1CVH2	A0A0D1DW92	RPOL4c domain-containing protein.	Uncharacterized protein.	0.998
UMAG_01595	UMAG_06156	A0A0D1CVH2	A0A0D1DT74	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
UMAG_01595	UMAG_10166	A0A0D1CVH2	A0A0D1E6I1	RPOL4c domain-containing protein.	Putative DNA-directed RNA polymerases I and III subunit protein.	0.999
UMAG_01595	UMAG_10785	A0A0D1CVH2	A0A0D1E352	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999
UMAG_02903	UMAG_01595	A0A0D1CQQ3	A0A0D1CVH2	Chromosome 7, whole genome shotgun sequence.	RPOL4c domain-containing protein.	0.999
UMAG_02903	UMAG_02966	A0A0D1CQQ3	A0A0D1C5R5	Chromosome 7, whole genome shotgun sequence.	Chromosome 7, whole genome shotgun sequence.	0.999
UMAG_02903	UMAG_04870	A0A0D1CQQ3	A0A0D1DW92	Chromosome 7, whole genome shotgun sequence.	Uncharacterized protein.	0.999
UMAG_02903	UMAG_06156	A0A0D1CQQ3	A0A0D1DT74	Chromosome 7, whole genome shotgun sequence.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
UMAG_02903	UMAG_10166	A0A0D1CQQ3	A0A0D1E6I1	Chromosome 7, whole genome shotgun sequence.	Putative DNA-directed RNA polymerases I and III subunit protein.	0.999
UMAG_02903	UMAG_10785	A0A0D1CQQ3	A0A0D1E352	Chromosome 7, whole genome shotgun sequence.	Uncharacterized protein.	0.999
UMAG_02966	UMAG_01595	A0A0D1C5R5	A0A0D1CVH2	Chromosome 7, whole genome shotgun sequence.	RPOL4c domain-containing protein.	0.999
UMAG_02966	UMAG_02903	A0A0D1C5R5	A0A0D1CQQ3	Chromosome 7, whole genome shotgun sequence.	Chromosome 7, whole genome shotgun sequence.	0.999
UMAG_02966	UMAG_04870	A0A0D1C5R5	A0A0D1DW92	Chromosome 7, whole genome shotgun sequence.	Uncharacterized protein.	0.999
UMAG_02966	UMAG_06156	A0A0D1C5R5	A0A0D1DT74	Chromosome 7, whole genome shotgun sequence.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
UMAG_02966	UMAG_10166	A0A0D1C5R5	A0A0D1E6I1	Chromosome 7, whole genome shotgun sequence.	Putative DNA-directed RNA polymerases I and III subunit protein.	0.999
UMAG_02966	UMAG_10785	A0A0D1C5R5	A0A0D1E352	Chromosome 7, whole genome shotgun sequence.	Uncharacterized protein.	0.999
UMAG_04870	UMAG_01595	A0A0D1DW92	A0A0D1CVH2	Uncharacterized protein.	RPOL4c domain-containing protein.	0.998
UMAG_04870	UMAG_02903	A0A0D1DW92	A0A0D1CQQ3	Uncharacterized protein.	Chromosome 7, whole genome shotgun sequence.	0.999