STRINGSTRING
UMAG_10546 UMAG_10546 UMAG_05449 UMAG_05449 UMAG_10347 UMAG_10347 UMAG_04723 UMAG_04723 UMAG_04820 UMAG_04820 UMAG_12015 UMAG_12015 UMAG_10914 UMAG_10914 UMAG_10531 UMAG_10531 UMAG_04603 UMAG_04603 UMAG_04306 UMAG_04306 UMAG_04013 UMAG_04013 UMAG_04089 UMAG_04089 UMAG_11779 UMAG_11779 UMAG_05184 UMAG_05184 UMAG_11688 UMAG_11688 UMAG_00983 UMAG_00983 UMAG_11308 UMAG_11308 UMAG_10016 UMAG_10016 UMAG_11035 UMAG_11035 UMAG_00575 UMAG_00575 UMAG_05501 UMAG_05501 UMAG_05577 UMAG_05577 UMAG_05785 UMAG_05785 UMAG_05790 UMAG_05790 UMAG_04384 UMAG_04384 UMAG_04157 UMAG_04157 UMAG_11129 UMAG_11129 UMAG_15082 UMAG_15082 UMAG_03743 UMAG_03743 UMAG_03788 UMAG_03788 UMAG_03793 UMAG_03793 UMAG_10447 UMAG_10447 UMAG_03244 UMAG_03244 UMAG_03280 UMAG_03280 UMAG_10071 UMAG_10071 UMAG_02311 UMAG_02311 UMAG_05143 UMAG_05143 UMAG_01648 UMAG_01648 UMAG_01883 UMAG_01883 UMAG_11302 UMAG_11302 UMAG_00183 UMAG_00183 UMAG_11828 UMAG_11828 UMAG_00692 UMAG_00692 UMAG_06037 UMAG_06037 UMAG_05830 UMAG_05830 UMAG_06029 UMAG_06029 UMAG_04715 UMAG_04715 UMAG_05327 UMAG_05327 UMAG_04698 UMAG_04698 UMAG_06410 UMAG_06410 UMAG_11545 UMAG_11545 UMAG_04098 UMAG_04098 UMAG_04234 UMAG_04234 UMAG_03626 UMAG_03626 UMAG_10833 UMAG_10833 UMAG_03379 UMAG_03379 UMAG_04129 UMAG_04129 UMAG_03877 UMAG_03877 UMAG_03966 UMAG_03966 UMAG_11964 UMAG_11964 UMAG_02065 UMAG_02065 UMAG_02102 UMAG_02102 UMAG_03543 UMAG_03543 UMAG_11881 UMAG_11881 UMAG_01784 UMAG_01784 UMAG_01626 UMAG_01626 UMAG_02607 UMAG_02607 UMAG_11717 UMAG_11717 UMAG_01093 UMAG_01093 UMAG_00878 UMAG_00878 UMAG_00144 UMAG_00144 UMAG_00152 UMAG_00152 UMAG_11885 UMAG_11885 UMAG_00399 UMAG_00399 UMAG_00480 UMAG_00480 UMAG_01867 UMAG_01867 UMAG_00543 UMAG_00543 UMAG_00592 UMAG_00592 UMAG_00275 UMAG_00275 UMAG_00443 UMAG_00443 UMAG_01200 UMAG_01200 UMAG_01338 UMAG_01338 UMAG_11634 UMAG_11634 UMAG_00400 UMAG_00400 RVB1 RVB1 EAF1 EAF1 ARP4 ARP4 DOT1 DOT1 SWR1 SWR1 ESA1 ESA1 SWC5 SWC5 RVB2 RVB2 HHT1 HHT1 EAF3 EAF3 HHT2 HHT2 SET1 SET1 SET2 SET2 SET5 SET5 HTB1 HTB1 HTA1 HTA1 YAF9 YAF9 SWC4 SWC4 INO80 INO80 HTZ1 HTZ1 DBP2 DBP2 HHF1 HHF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UMAG_10546Chromosome 19, whole genome shotgun sequence. (184 aa)
UMAG_05449Uncharacterized protein. (1481 aa)
UMAG_10347Uncharacterized protein; Belongs to the actin family. (813 aa)
UMAG_04723Putative wd-repeat protein 5. (355 aa)
UMAG_04820Uncharacterized protein. (1009 aa)
UMAG_12015Chromosome 16, whole genome shotgun sequence. (331 aa)
UMAG_10914Chromosome 16, whole genome shotgun sequence. (1132 aa)
UMAG_10531Uncharacterized protein. (457 aa)
UMAG_04603Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (918 aa)
UMAG_04306Chromosome 12, whole genome shotgun sequence. (300 aa)
UMAG_04013PAPA-1 domain-containing protein. (545 aa)
UMAG_04089Uncharacterized protein. (297 aa)
UMAG_11779Putative transcriptional regulator. (1721 aa)
UMAG_05184PWWP domain-containing protein. (348 aa)
UMAG_11688CHZ domain-containing protein. (133 aa)
UMAG_00983SANT domain-containing protein. (2193 aa)
UMAG_11308Histone deacetylase. (585 aa)
UMAG_10016Chromosome 1, whole genome shotgun sequence. (1161 aa)
UMAG_11035Bromo domain-containing protein. (1212 aa)
UMAG_00575Chromosome 1, whole genome shotgun sequence. (882 aa)
UMAG_05501TPR-containing protein Mql1. (1292 aa)
UMAG_05577Uncharacterized protein. (1230 aa)
UMAG_05785Chromosome 16, whole genome shotgun sequence. (441 aa)
UMAG_05790Chromosome 16, whole genome shotgun sequence. (796 aa)
UMAG_04384Uncharacterized protein. (277 aa)
UMAG_04157Chromosome 12, whole genome shotgun sequence. (384 aa)
UMAG_11129Chromosome 12, whole genome shotgun sequence. (272 aa)
UMAG_15082Chromosome 10, whole genome shotgun sequence. (1851 aa)
UMAG_03743Chromosome 10, whole genome shotgun sequence; Belongs to the actin family. (732 aa)
UMAG_03788Chromosome 10, whole genome shotgun sequence. (97 aa)
UMAG_03793Chromosome 10, whole genome shotgun sequence. (632 aa)
UMAG_10447Chromosome 9, whole genome shotgun sequence. (182 aa)
UMAG_03244Chromatin modification-related protein. (732 aa)
UMAG_03280Chromosome 8, whole genome shotgun sequence. (731 aa)
UMAG_10071Uncharacterized protein. (216 aa)
UMAG_02311PHD domain-containing protein. (1100 aa)
UMAG_05143Putative nucleosome assembly protein I; Belongs to the nucleosome assembly protein (NAP) family. (413 aa)
UMAG_01648Uncharacterized protein. (824 aa)
UMAG_01883Uncharacterized protein. (232 aa)
UMAG_11302Chromatin modification-related protein. (538 aa)
UMAG_00183Chromosome 1, whole genome shotgun sequence. (572 aa)
UMAG_11828Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (442 aa)
UMAG_00692Chromosome 1, whole genome shotgun sequence. (271 aa)
UMAG_06037Chromosome 21, whole genome shotgun sequence. (653 aa)
UMAG_05830Uncharacterized protein. (349 aa)
UMAG_06029Chromosome 21, whole genome shotgun sequence. (1227 aa)
UMAG_04715Uncharacterized protein. (207 aa)
UMAG_05327Chromosome 19, whole genome shotgun sequence. (509 aa)
UMAG_04698Uncharacterized protein. (296 aa)
UMAG_06410Chromosome 23, whole genome shotgun sequence. (796 aa)
UMAG_11545YL1_C domain-containing protein. (199 aa)
UMAG_04098Chromosome 12, whole genome shotgun sequence. (202 aa)
UMAG_04234Chromosome 12, whole genome shotgun sequence. (568 aa)
UMAG_03626Chromosome 9, whole genome shotgun sequence. (773 aa)
UMAG_10833Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1159 aa)
UMAG_03379Chromosome 8, whole genome shotgun sequence. (716 aa)
UMAG_04129Chromosome 12, whole genome shotgun sequence. (983 aa)
UMAG_03877Uncharacterized protein. (1020 aa)
UMAG_03966Uncharacterized protein. (774 aa)
UMAG_11964Chromosome 10, whole genome shotgun sequence. (902 aa)
UMAG_02065Histone deacetylase. (569 aa)
UMAG_02102Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (727 aa)
UMAG_03543Chromatin modification-related protein. (339 aa)
UMAG_11881PHD-type domain-containing protein. (1182 aa)
UMAG_01784Glutathione peroxidase; Belongs to the glutathione peroxidase family. (161 aa)
UMAG_01626Uncharacterized protein. (575 aa)
UMAG_02607Putative chromatin remodeling complex ATPase subunit. (1108 aa)
UMAG_11717HDAC_interact domain-containing protein. (1461 aa)
UMAG_01093Enhancer of polycomb-like protein. (1516 aa)
UMAG_00878Bromo domain-containing protein. (826 aa)
UMAG_00144Chromosome 1, whole genome shotgun sequence. (503 aa)
UMAG_00152Chromosome 1, whole genome shotgun sequence. (738 aa)
UMAG_11885Uncharacterized protein. (2119 aa)
UMAG_00399Chromosome 1, whole genome shotgun sequence. (943 aa)
UMAG_00480Chromosome 1, whole genome shotgun sequence. (1140 aa)
UMAG_01867SET domain-containing protein. (964 aa)
UMAG_00543Chromosome 1, whole genome shotgun sequence. (1353 aa)
UMAG_00592Chromosome 1, whole genome shotgun sequence. (869 aa)
UMAG_00275Chromosome 1, whole genome shotgun sequence. (1247 aa)
UMAG_00443Chromosome 1, whole genome shotgun sequence. (668 aa)
UMAG_01200Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (738 aa)
UMAG_01338B30.2/SPRY domain-containing protein. (828 aa)
UMAG_11634Chromosome 1, whole genome shotgun sequence. (1084 aa)
UMAG_00400Chromosome 1, whole genome shotgun sequence. (1367 aa)
RVB1RuvB-like helicase 1; DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing (By similarity); Belongs to the RuvB family. (488 aa)
EAF1Chromatin modification-related protein EAF1; Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair (By similarity). (1654 aa)
ARP4Actin-related protein 4; Chromatin interaction component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair. Is required for NuA4 complex integrity. Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the INO80 complex which remodels chromatin by shifting nucleosomes [...] (534 aa)
DOT1Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically trimethylates histone H3 to form H3K79me3. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histone. (798 aa)
SWR1Helicase SWR1; Catalytic component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling; Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily. (1830 aa)
ESA1Histone acetyltransferase ESA1; Catalytic component of the NuA4 histone acetyltransferase (HAT) complex which is involved in epigenetic transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4, H3, H2B, H2A and H2A variant H2A.Z. Acetylates histone H4 to form H4K5ac, H4K8ac, H4K12ac and H4K16ac, histone H3 to form H3K14ac, and histone H2A to form H2AK4ac and H2AK7ac. Acetylation of histone H4 is essential for DNA double-strand break repair through homologous recombination. Involved in cell cycle progression. Recruitment to promoters depends on [...] (565 aa)
SWC5SWR1-complex protein 5; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in chromosome stability (By similarity). (354 aa)
RVB2RuvB-like helicase 2; DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing (By similarity); Belongs to the RuvB family. (476 aa)
HHT1Histone H3.1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
EAF3Chromatin modification-related protein EAF3; Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair (By similarity). (330 aa)
HHT2Histone H3.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
SET1Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. Belongs to the class V-like SAM-binding methyltransferase superfamily. (1468 aa)
SET2Histone-lysine N-methyltransferase, H3 lysine-36 specific; Histone methyltransferase that trimethylates histone H3 'Lys- 36' forming H3K36me3. Involved in transcription elongation as well as in transcription repression; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (972 aa)
SET5Potential protein lysine methyltransferase SET5; Putative protein lysine methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET5 subfamily. (498 aa)
HTB1Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (142 aa)
HTA1Histone H2A; Core component of nucleosome which plays a central role in DNA double strand break (DSB) repair. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
YAF9Protein AF-9 homolog; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised (By similarity). (431 aa)
SWC4SWR1-complex protein 4; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair (By similarity). (615 aa)
INO80Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair. (1910 aa)
HTZ1Histone H2A.Z; Variant histone H2A which can replace H2A in some nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. This variant is enriched at promoters, it may keep them in a repressed state until the appropriate activa [...] (135 aa)
DBP2ATP-dependent RNA helicase DBP2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (552 aa)
HHF1Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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