22 items (Ustilago maydis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UMAG_10936	Chromosome 16, whole genome shotgun sequence. (71 aa)
	UMAG_01363	Uncharacterized protein. (364 aa)
	UMAG_01184	RNA_pol_L_2 domain-containing protein. (164 aa)
	UMAG_01133	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1289 aa)
	UMAG_02059	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (207 aa)
	UMAG_02628	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1795 aa)
	UMAG_10785	Uncharacterized protein. (540 aa)
	UMAG_02493	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1566 aa)
	UMAG_02324	RNA_pol_L_2 domain-containing protein. (145 aa)
	UMAG_02446	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1169 aa)
	UMAG_10512	Chromosome 10, whole genome shotgun sequence. (208 aa)
	UMAG_10433	Chromosome 12, whole genome shotgun sequence. (138 aa)
	UMAG_10431	Chromosome 12, whole genome shotgun sequence. (760 aa)
	UMAG_10429	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1241 aa)
	UMAG_06156	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1400 aa)
	UMAG_10166	Putative DNA-directed RNA polymerases I and III subunit protein. (397 aa)
	UMAG_02903	Chromosome 7, whole genome shotgun sequence. (249 aa)
	UMAG_10656	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (492 aa)
	UMAG_03550	Chromosome 9, whole genome shotgun sequence. (329 aa)
	UMAG_02966	Chromosome 7, whole genome shotgun sequence. (368 aa)
	UMAG_03863	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1774 aa)
	UMAG_10194	Putative DNA-directed RNA polymerase core subunit RPB10. (71 aa)

Your Current Organism:

Ustilago maydis

NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UMAG_01133	UMAG_01184	A0A0D1E5E8	A0A0D1E5K3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA_pol_L_2 domain-containing protein.	0.998
UMAG_01133	UMAG_01363	A0A0D1E5E8	A0A0D1E694	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
UMAG_01133	UMAG_02059	A0A0D1E5E8	A0A0D1E570	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.891
UMAG_01133	UMAG_02324	A0A0D1E5E8	A0A0D1E1J3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA_pol_L_2 domain-containing protein.	0.929
UMAG_01133	UMAG_02446	A0A0D1E5E8	A0A0D1E1A2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.725
UMAG_01133	UMAG_02493	A0A0D1E5E8	A0A0D1E254	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.835
UMAG_01133	UMAG_02628	A0A0D1E5E8	A0A0D1E492	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
UMAG_01133	UMAG_02903	A0A0D1E5E8	A0A0D1CQQ3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 7, whole genome shotgun sequence.	0.915
UMAG_01133	UMAG_02966	A0A0D1E5E8	A0A0D1C5R5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 7, whole genome shotgun sequence.	0.928
UMAG_01133	UMAG_03550	A0A0D1E5E8	A0A0D1CPC3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 9, whole genome shotgun sequence.	0.927
UMAG_01133	UMAG_03863	A0A0D1E5E8	A0A0D1C3I0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.742
UMAG_01133	UMAG_06156	A0A0D1E5E8	A0A0D1DT74	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.967
UMAG_01133	UMAG_10166	A0A0D1E5E8	A0A0D1E6I1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerases I and III subunit protein.	0.999
UMAG_01133	UMAG_10194	A0A0D1E5E8	A0A0D1E6U2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase core subunit RPB10.	0.999
UMAG_01133	UMAG_10431	A0A0D1E5E8	A0A0D1DVP9	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 12, whole genome shotgun sequence.	0.972
UMAG_01133	UMAG_10433	A0A0D1E5E8	A0A0D1DZ02	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 12, whole genome shotgun sequence.	0.999
UMAG_01133	UMAG_10512	A0A0D1E5E8	A0A0D1E0K8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 10, whole genome shotgun sequence.	0.999
UMAG_01133	UMAG_10785	A0A0D1E5E8	A0A0D1E352	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.942
UMAG_01133	UMAG_10936	A0A0D1E5E8	A0A0D1DRC0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 16, whole genome shotgun sequence.	0.999
UMAG_01184	UMAG_01133	A0A0D1E5K3	A0A0D1E5E8	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998