16 items (Ustilago maydis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UMAG_10433	Chromosome 12, whole genome shotgun sequence. (138 aa)
	UMAG_11550	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (109 aa)
	UMAG_03058	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (715 aa)
	UMAG_04870	Uncharacterized protein. (559 aa)
	UMAG_06156	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1400 aa)
	UMAG_10936	Chromosome 16, whole genome shotgun sequence. (71 aa)
	UMAG_01595	RPOL4c domain-containing protein. (275 aa)
	UMAG_02903	Chromosome 7, whole genome shotgun sequence. (249 aa)
	UMAG_04460	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (161 aa)
	UMAG_02966	Chromosome 7, whole genome shotgun sequence. (368 aa)
	UMAG_10194	Putative DNA-directed RNA polymerase core subunit RPB10. (71 aa)
	UMAG_10166	Putative DNA-directed RNA polymerases I and III subunit protein. (397 aa)
	UMAG_01184	RNA_pol_L_2 domain-containing protein. (164 aa)
	UMAG_02059	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (207 aa)
	UMAG_10785	Uncharacterized protein. (540 aa)
	UMAG_10512	Chromosome 10, whole genome shotgun sequence. (208 aa)

Your Current Organism:

Ustilago maydis

NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UMAG_01184	UMAG_01595	A0A0D1E5K3	A0A0D1CVH2	RNA_pol_L_2 domain-containing protein.	RPOL4c domain-containing protein.	0.997
UMAG_01184	UMAG_02059	A0A0D1E5K3	A0A0D1E570	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.994
UMAG_01184	UMAG_02903	A0A0D1E5K3	A0A0D1CQQ3	RNA_pol_L_2 domain-containing protein.	Chromosome 7, whole genome shotgun sequence.	0.999
UMAG_01184	UMAG_02966	A0A0D1E5K3	A0A0D1C5R5	RNA_pol_L_2 domain-containing protein.	Chromosome 7, whole genome shotgun sequence.	0.988
UMAG_01184	UMAG_03058	A0A0D1E5K3	A0A0D1DYD4	RNA_pol_L_2 domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
UMAG_01184	UMAG_04460	A0A0D1E5K3	A0A0D1CKL7	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
UMAG_01184	UMAG_04870	A0A0D1E5K3	A0A0D1DW92	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
UMAG_01184	UMAG_06156	A0A0D1E5K3	A0A0D1DT74	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
UMAG_01184	UMAG_10166	A0A0D1E5K3	A0A0D1E6I1	RNA_pol_L_2 domain-containing protein.	Putative DNA-directed RNA polymerases I and III subunit protein.	0.999
UMAG_01184	UMAG_10194	A0A0D1E5K3	A0A0D1E6U2	RNA_pol_L_2 domain-containing protein.	Putative DNA-directed RNA polymerase core subunit RPB10.	0.999
UMAG_01184	UMAG_10433	A0A0D1E5K3	A0A0D1DZ02	RNA_pol_L_2 domain-containing protein.	Chromosome 12, whole genome shotgun sequence.	0.999
UMAG_01184	UMAG_10512	A0A0D1E5K3	A0A0D1E0K8	RNA_pol_L_2 domain-containing protein.	Chromosome 10, whole genome shotgun sequence.	0.999
UMAG_01184	UMAG_10785	A0A0D1E5K3	A0A0D1E352	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
UMAG_01184	UMAG_10936	A0A0D1E5K3	A0A0D1DRC0	RNA_pol_L_2 domain-containing protein.	Chromosome 16, whole genome shotgun sequence.	0.999
UMAG_01184	UMAG_11550	A0A0D1E5K3	A0A0D1DYK5	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.994
UMAG_01595	UMAG_01184	A0A0D1CVH2	A0A0D1E5K3	RPOL4c domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.997
UMAG_01595	UMAG_02059	A0A0D1CVH2	A0A0D1E570	RPOL4c domain-containing protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.997
UMAG_01595	UMAG_02903	A0A0D1CVH2	A0A0D1CQQ3	RPOL4c domain-containing protein.	Chromosome 7, whole genome shotgun sequence.	0.999
UMAG_01595	UMAG_02966	A0A0D1CVH2	A0A0D1C5R5	RPOL4c domain-containing protein.	Chromosome 7, whole genome shotgun sequence.	0.999
UMAG_01595	UMAG_03058	A0A0D1CVH2	A0A0D1DYD4	RPOL4c domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998