21 items (Ustilago maydis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UMAG_06237	Uncharacterized protein. (1441 aa)
	UMAG_10143	Putative TATA-binding protein. (239 aa)
	UMAG_03584	Chromosome 9, whole genome shotgun sequence. (520 aa)
	UMAG_04460	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (161 aa)
	UMAG_10858	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (129 aa)
	UMAG_10751	BSD domain-containing protein. (679 aa)
	UMAG_15039	SWIB domain-containing protein. (240 aa)
	UMAG_04230	Chromosome 12, whole genome shotgun sequence. (2115 aa)
	UMAG_04902	Chromosome 15, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (379 aa)
	UMAG_10166	Putative DNA-directed RNA polymerases I and III subunit protein. (397 aa)
	UMAG_10194	Putative DNA-directed RNA polymerase core subunit RPB10. (71 aa)
	UMAG_15080	Uncharacterized protein. (612 aa)
	UMAG_01371	Uncharacterized protein. (825 aa)
	UMAG_05888	Uncharacterized protein. (315 aa)
	UMAG_10433	Chromosome 12, whole genome shotgun sequence. (138 aa)
	UMAG_10512	Chromosome 10, whole genome shotgun sequence. (208 aa)
	UMAG_02628	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1795 aa)
	UMAG_01133	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1289 aa)
	UMAG_01184	RNA_pol_L_2 domain-containing protein. (164 aa)
	UMAG_10936	Chromosome 16, whole genome shotgun sequence. (71 aa)
	UMAG_01363	Uncharacterized protein. (364 aa)

Your Current Organism:

Ustilago maydis

NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UMAG_01133	UMAG_01184	A0A0D1E5E8	A0A0D1E5K3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA_pol_L_2 domain-containing protein.	0.998
UMAG_01133	UMAG_01363	A0A0D1E5E8	A0A0D1E694	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
UMAG_01133	UMAG_01371	A0A0D1E5E8	A0A0D1E7K3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.998
UMAG_01133	UMAG_02628	A0A0D1E5E8	A0A0D1E492	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
UMAG_01133	UMAG_03584	A0A0D1E5E8	A0A0D1CPH3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 9, whole genome shotgun sequence.	0.999
UMAG_01133	UMAG_04460	A0A0D1E5E8	A0A0D1CKL7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.998
UMAG_01133	UMAG_04902	A0A0D1E5E8	A0A0D1DRT0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 15, whole genome shotgun sequence; Belongs to the protein kinase superfamily.	0.753
UMAG_01133	UMAG_05888	A0A0D1E5E8	A0A0D1DU84	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.612
UMAG_01133	UMAG_10143	A0A0D1E5E8	A0A0D1CTQ8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative TATA-binding protein.	0.875
UMAG_01133	UMAG_10166	A0A0D1E5E8	A0A0D1E6I1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerases I and III subunit protein.	0.999
UMAG_01133	UMAG_10194	A0A0D1E5E8	A0A0D1E6U2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase core subunit RPB10.	0.999
UMAG_01133	UMAG_10433	A0A0D1E5E8	A0A0D1DZ02	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 12, whole genome shotgun sequence.	0.999
UMAG_01133	UMAG_10512	A0A0D1E5E8	A0A0D1E0K8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 10, whole genome shotgun sequence.	0.999
UMAG_01133	UMAG_10751	A0A0D1E5E8	A0A0D1CHP8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BSD domain-containing protein.	0.862
UMAG_01133	UMAG_10858	A0A0D1E5E8	A0A0D1CIL2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
UMAG_01133	UMAG_10936	A0A0D1E5E8	A0A0D1DRC0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chromosome 16, whole genome shotgun sequence.	0.999
UMAG_01133	UMAG_15080	A0A0D1E5E8	A0A0D1E7G1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.636
UMAG_01184	UMAG_01133	A0A0D1E5K3	A0A0D1E5E8	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
UMAG_01184	UMAG_01363	A0A0D1E5K3	A0A0D1E694	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
UMAG_01184	UMAG_01371	A0A0D1E5K3	A0A0D1E7K3	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.978